Fish Single-cell RNA Database

GENE ID: ENSDARG00000052110

Symbol	Location	Gene type	Genome version	Species
mboat4	5: 66157117 ~ 66160415 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000052110 (mboat4), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000068557	htr5ab	7: 41080649 ~ 41102498 (-)
ENSDARG00000099470	muc5.3	7: 72291181 ~ 72337942 (-)
ENSDARG00000019549	cds1	5: 40009958 ~ 40040488 (-)
ENSDARG00000068088	tcnba	5: 30617915 ~ 30620625 (-)
ENSDARG00000035577	cds2	5: 21144269 ~ 21172199 (+)
ENSDARG00000052110	mboat4	5: 66157117 ~ 66160415 (-)
ENSDARG00000096234	tac4	3: 34623560 ~ 34624745 (-)
ENSDARG00000097651	tgm8	6: 60036767 ~ 60041033 (+)
ENSDARG00000023858	ccdc174	6: 40429773 ~ 40435025 (-)
ENSDARG00000054239	ghrl	6: 40437987 ~ 40439615 (+)
ENSDARG00000070618	tatdn2	6: 40439858 ~ 40449399 (-)
ENSDARG00000038869	htr5aa	2: 29925561 ~ 29940519 (+)
ENSDARG00000056230	ghsra	2: 25551457 ~ 25553632 (-)
ENSDARG00000094160	si:ch73-160h15.3	1: 46830809 ~ 46832880 (-)
ENSDARG00000029803	oxgr1b	9: 29323163 ~ 29328009 (+)
ENSDARG00000102888	gpr39	9: 56422311 ~ 56426047 (+)
ENSDARG00000054914	dgat1b	16: 30948451 ~ 31000727 (-)
ENSDARG00000062297	soat1	8: 14886452 ~ 14910223 (+)
ENSDARG00000074428	hhat	17: 25777330 ~ 25831569 (-)
ENSDARG00000018529	lipf	12: 17158642 ~ 17201028 (-)
ENSDARG00000092160	ferd3l	19: 2235690 ~ 2235933 (-)
ENSDARG00000091207	mlnr	15: 2976120 ~ 2985599 (-)
ENSDARG00000041421	taz	23: 4915595 ~ 4925724 (-)
ENSDARG00000092799	camta2	23: 44655942 ~ 44701374 (+)
ENSDARG00000092916	mlnl	21: 11969603 ~ 11981523 (+)
ENSDARG00000002600	pcsk1	21: 11684830 ~ 11722343 (+)
ENSDARG00000057117	ghsrb	24: 26742226 ~ 26746179 (+)
ENSDARG00000103271	pla2g15	25: 13689060 ~ 13703826 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	Pancreas endocrine cells (cluster: 15)	potential marker	NA
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment
GSE158142 (3dpf)	head	baseline	3dpf, untreatment
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000052110

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences