GENE ID: ENSDARG00000102558

Symbol Location Gene type Genome version Species
pde6ha 6: 344423 ~ 346084 (-) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Pineal gland (cluster: 23)
 potential marker
 NA
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Neuron (cluster: 11)
Photoreceptor cells (cluster: 16)
 potential marker
potential marker
 NA
NA
PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Pancreas endocrine cells (cluster: 3)
 potential marker
 NA
GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 Corticotropes (cluster: 3)
 potential marker
 NA
GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg Blue cone opsin (cluster: 1)
Green cone opsin (cluster: 8)
 potential marker
potential marker
 NA
NA
PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih Cone (cluster: 3)
 potential marker
 NA
PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih Cone (cluster: 4)
 potential marker
 NA
PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
PRJNA734348 (shield, dnmt1) embryo growth 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
PRJNA734348 (dome, control) embryo baseline 4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development
GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled)
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
PRJNA734348 (shield, control) embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled)
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury
PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury
PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood
PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment
GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet
PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR)
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
PRJNA641144 (D_PRO) tumor disease adult, ZMEL1-PRO cells in vitro individual culture
PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
PRJNA641144 (C_PRO) tumor disease adult, ZMEL1-PRO cells in vitro co-culture
PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases
PRJNA641144 (D_INV) tumor disease adult, ZMEL1-INV cells in vitro individual culture
PRJNA641144 (P_PRO) tumor disease adult, ZMEL1-PRO cells in vivo primary tumors
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/-

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