|
Dataset ID |
Tissue / Organ |
Experiment type |
Sample |
Cell type |
Marker class |
Evidence |
|
PRJNA554650 (6.5dpf) |
brain |
baseline |
6.5dpf, whole brain of nr1d1:VNP fish |
NA |
NA |
NA |
|
PRJNA415636 (brain) |
brain |
baseline |
adult, Zebrabow M, brain |
NA |
NA |
NA |
|
GSE158142 (5dpf) |
brain, eye |
baseline |
5dpf, untreatment |
NA |
NA |
NA |
|
GSE158142 (8dpf) |
brain, eye |
baseline |
8dpf, untreatment |
NA |
NA |
NA |
|
GSE158142 (15dpf) |
brain, eye |
baseline |
15dpf, untreatment |
NA |
NA |
NA |
|
GSE173972 (WT, ezh1+|+) |
embryo |
baseline |
1.25dpf, Kdrl-positive embryos |
NA |
NA |
NA |
|
GSE173972 (HET, ezh1+|-) |
embryo |
hematopoietic |
1.25dpf, Kdrl-positive embryos |
NA |
NA |
NA |
|
GSE173972 (KO, ezh1-|-) |
embryo |
hematopoietic |
1.25dpf, Kdrl-positive embryos |
NA |
NA |
NA |
|
GSE106587 (WT) |
embryo |
baseline |
12hpf, 6 somites, wild-type TLAB embryo |
NA |
NA |
NA |
|
GSE126647 (control) |
embryo |
baseline |
1.17dpf, control nkx2.5:ZsYellow+ cells |
NA |
NA |
NA |
|
PRJNA656271 (2dpf) |
embryo |
baseline |
2dpf, FACS-isolated EGFP+ cells |
NA |
NA |
NA |
|
PRJNA564810 (5dpf) |
embryo |
baseline |
5dpf, a single-cell transcriptome atlas for zebrafish development |
NA |
NA |
NA |
|
PRJNA564810 (2dpf) |
embryo |
baseline |
2dpf, a single-cell transcriptome atlas for zebrafish development |
NA |
NA |
NA |
|
PRJNA564810 (1dpf) |
embryo |
baseline |
1dpf, a single-cell transcriptome atlas for zebrafish development |
NA |
NA |
NA |
|
GSE158142 (3dpf) |
head |
baseline |
3dpf, untreatment |
NA |
NA |
NA |
|
PRJNA754013 (zebrafish) |
hypothalamus |
baseline |
adult, male, female, untreatment |
NA |
NA |
NA |
|
GSE150498 (wildtype, untreated) |
intestine |
baseline |
6dpf, wildtype, untreated |
NA |
NA |
NA |
|
GSE150498 (nod2-|-, untreated) |
intestine |
disease |
6dpf, nod2-/-, untreated |
NA |
NA |
NA |
|
GSE150498 (wildtype, 1X DSS) |
intestine |
disease |
6dpf, wildtype, 1X DSS |
NA |
NA |
NA |
|
GSE150498 (nod2-|-, 1X DSS) |
intestine |
disease |
6dpf, nod2-/-, 1X DSS |
NA |
NA |
NA |
|
GSE150498 (wildtype, 2X DSS+BZA) |
intestine |
disease |
6dpf, wildtype, 2X DSS+BZA |
NA |
NA |
NA |
|
PRJNA668529 (3d) |
olfactory rosette |
disease |
3mpf, intranasal 100ng r-Spike 3 days |
NA |
NA |
NA |
|
PRJNA668529 (3h) |
olfactory rosette |
disease |
3mpf, intranasal 100ng r-Spike 3 hours |
NA |
NA |
NA |
|
GSE148591 (6mpf) |
pituitary |
baseline |
6mpf, male, Sox17:CreERT2 |
NA |
NA |
NA |
|
GSE148591 (3mpf) |
pituitary |
transplant |
3mpf, graft transplantation during early embryogenesis |
NA |
NA |
NA |
|
GSE175929 (5mpf) |
retina |
baseline |
5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg |
NA |
NA |
NA |
|
PRJNA672101 (nrl-KO) |
retina |
growth |
5mpf, three retinas from nrl-KO zebrafsih |
NA |
NA |
NA |
|
PRJNA672101 (WT) |
retina |
baseline |
5mpf, three retinas from WT zebrafsih |
NA |
NA |
NA |
|
GSE152982 (wild type) |
trunk |
baseline |
1.25dpf, untreatment |
NA |
NA |
NA |
|
GSE163907 (24hpf) |
trunk |
baseline |
24hpf, trunk tg(sox10:GFP) positive cells |
NA |
NA |
NA |
|
GSE176129 (pdgfrb-positive) |
whole body |
baseline |
5dpf, FACS-isolated pdgfrb-positive cells |
NA |
NA |
NA |
|
GSE158099 (WT) |
whole body |
baseline |
16dpf, cd41:GFPlow-WT |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |