Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
nppb | 8: 48609521 ~ 48610544 (+) | protein_coding | GRCz11 | Danio rerio |
Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
---|---|---|---|---|---|---|---|
GSE126647 (control) | embryo | baseline | 1.17dpf, control nkx2.5:ZsYellow+ cells |
Differentiated art.CMs (cluster: 2) |
potential marker |
NA |
|
GSE126647 (Pbx4-depleted) | embryo | growth | 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells |
Differentiated art.ventricle (cluster: 4) |
potential marker |
NA |
|
PRJNA564810 (1dpf) | embryo | baseline | 1dpf, a single-cell transcriptome atlas for zebrafish development |
Heart primordium (cluster: 30) |
potential marker |
NA |
|
PRJNA608912 (wt_unjuried) | heart | baseline | 5mpf, wild type, uninjured | ||||
PRJNA608912 (wt_2dpi) | heart | regeneration | 5mpf, wild type, 2 days post injury | ||||
PRJNA608912 (wt_7dpi) | heart | regeneration | 5mpf, wild type, 7 days post injury |
Heart primordium (cluster: 2) |
potential marker |
NA |
|
PRJNA608912 (wt_14dpi) | heart | regeneration | 5mpf, wild type, 14 days post injury |
Heart primordium (cluster: 2) |
potential marker |
NA |
|
PRJNA608912 (kit_uninjuried) | heart | regeneration | 5mpf, kit mutant, uninjured |
Heart primordium (cluster: 10) |
potential marker |
NA |
|
PRJNA608912 (kit_2dpi) | heart | regeneration | 5mpf, kit mutant, 2 days post injury |
Endocardial endothelial cells (cluster: 3) Heart primordium (cluster: 7) |
potential marker potential marker |
NA NA |
|
PRJNA608912 (kit_7dpi) | heart | regeneration | 5mpf, kit mutant, 7 days post injury |
Heart primordium (cluster: 5) |
potential marker |
NA |
|
PRJNA608912 (kit_14dpi) | heart | regeneration | 5mpf, kit mutant, 14 days post injury |
Heart primordium (cluster: 4) |
potential marker |
NA |
|
PRJNA415636 (brain) | brain | baseline | adult, Zebrabow M, brain | ||||
PRJNA554650 (6.5dpf) | brain | baseline | 6.5dpf, whole brain of nr1d1:VNP fish | ||||
GSE158142 (15dpf) | brain, eye | baseline | 15dpf, untreatment | ||||
GSE158142 (8dpf) | brain, eye | baseline | 8dpf, untreatment | ||||
GSE151354 (wild type) | cartilage | baseline | 21dpf, wild type | ||||
PRJNA564810 (5dpf) | embryo | baseline | 5dpf, a single-cell transcriptome atlas for zebrafish development | ||||
GSE106587 (WT) | embryo | baseline | 12hpf, 6 somites, wild-type TLAB embryo | ||||
PRJNA640816 (2.9dpf) | embryo | baseline | 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells | ||||
GSE106587 (MZoep mutant) | embryo | baseline | 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo | ||||
PRJNA564810 (2dpf) | embryo | baseline | 2dpf, a single-cell transcriptome atlas for zebrafish development | ||||
PRJNA640816 (2dpf) | embryo | baseline | 2dpf, FACS isolated -4.9sox10:EGFP+ cells | ||||
PRJNA706197 (18hpf) | embryo | baseline | 18hpf, FACS sorted sox10:nEOS cells | ||||
GSE161712 (M. marinum) | granulomas | disease | adult, infected with bacteria of M. marinum | ||||
GSE158142 (20hpf) | head | baseline | 20hpf, 21-22 somites, untreatment | ||||
GSE158142 (1.5dpf) | head | baseline | 1.5dpf, untreatment | ||||
PRJNA415636 (heart, blood) | heart, blood | baseline | adult, Zebrabow M, heart and blood | ||||
PRJNA754013 (zebrafish) | hypothalamus | baseline | adult, male, female, untreatment | ||||
GSE150498 (nod2-|-, 1X DSS) | intestine | disease | 6dpf, nod2-/-, 1X DSS | ||||
GSE150498 (DSS treated) | intestine | disease | 6dpf, DSS treated | ||||
GSE150498 (wildtype, 1X DSS) | intestine | disease | 6dpf, wildtype, 1X DSS | ||||
PRJNA605021 (supporting cells) | neuromast | baseline | 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae | ||||
PRJNA668529 (3d) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 days | ||||
PRJNA668529 (3h) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 hours | ||||
GSE148591 (3mpf) | pituitary | transplant | 3mpf, graft transplantation during early embryogenesis | ||||
GSE148591 (6mpf) | pituitary | baseline | 6mpf, male, Sox17:CreERT2 | ||||
PRJNA415636 (primary pancreatic islet) | primary pancreatic islet | baseline | adult, Zebrabow M, primary pancreatic islet | ||||
GSE122680 (14dpf) | retina | baseline | 14dpf, WT, untreatment | ||||
GSE158099 (WT) | whole body | baseline | 16dpf, cd41:GFPlow-WT | ||||
GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | ||||
GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | ||||
GSE176129 (pdgfrb-positive) | whole body | baseline | 5dpf, FACS-isolated pdgfrb-positive cells | ||||
GSE158099 (runx1 -|-) | whole body | hematopoietic | 10dpf, cd41:GFPlow-runx1-/- |