Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
prph2b | 13: 3252950 ~ 3258772 (+) | protein_coding | GRCz11 | Danio rerio |
Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
---|---|---|---|---|---|---|---|
GSE158142 (5dpf) | brain, eye | baseline | 5dpf, untreatment |
Retina (cluster: 10) |
potential marker |
NA |
|
GSE158142 (8dpf) | brain, eye | baseline | 8dpf, untreatment |
Retina (cluster: 11) |
potential marker |
NA |
|
PRJNA564810 (5dpf) | embryo | baseline | 5dpf, a single-cell transcriptome atlas for zebrafish development |
Neuron (cluster: 11) Photoreceptor cells (cluster: 16) |
potential marker potential marker |
NA NA |
|
GSE158142 (3dpf) | head | baseline | 3dpf, untreatment |
Retina (cluster: 11) |
potential marker |
NA |
|
PRJNA672101 (nrl-KO) | retina | growth | 5mpf, three retinas from nrl-KO zebrafsih |
Cone (cluster: 3) |
potential marker |
NA |
|
PRJNA672101 (WT) | retina | baseline | 5mpf, three retinas from WT zebrafsih |
Cone (cluster: 4) |
potential marker |
NA |
|
GSE158849 (labeled) | embryo | baseline | 6hpf, WT, 4sUTP injected (labeled) | ||||
GSE158849 (unlabeled) | embryo | baseline | 6hpf, WT, 4sUTP injected (unlabeled) | ||||
PRJNA734348 (shield, control) | embryo | baseline | 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) | ||||
PRJNA734348 (shield, dnmt1) | embryo | growth | 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) | ||||
GSE168695 (5dpf) | embryo | baseline | 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos | ||||
PRJNA564810 (2dpf) | embryo | baseline | 2dpf, a single-cell transcriptome atlas for zebrafish development | ||||
GSE158142 (12hpf) | head | baseline | 12hpf, 6 somites, untreatment | ||||
GSE158142 (16hpf) | head | baseline | 16hpf, 14 somites, untreatment | ||||
GSE158142 (2dpf) | head | baseline | 2dpf, untreatment | ||||
PRJNA668529 (3d) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 days | ||||
GSE175929 (5mpf) | retina | baseline | 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg | ||||
GSE122680 (24hpf) | retina | baseline | 24hpf, WT, untreatment | ||||
GSE122680 (3dpf) | retina | baseline | 3dpf, WT, untreatment | ||||
GSE122680 (14dpf) | retina | baseline | 14dpf, WT, untreatment | ||||
GSE122680 (2dpf) | retina | baseline | 2dpf, WT, untreatment | ||||
GSE176129 (pdgfrb-positive) | whole body | baseline | 5dpf, FACS-isolated pdgfrb-positive cells |