GENE ID: ENSDARG00000096616

Symbol Location Gene type Genome version Species
si:ch211-255p10.3 12: 4677193 ~ 4683325 (-) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Muscle cells (cluster: 17)
 potential marker
 NA
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells Muscle cells (cluster: 11)
 potential marker
 NA
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Skeletal muscle cells (cluster: 12)
 potential marker
 NA
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Skeletal muscle cells (cluster: 17)
Skeletal muscle cells (cluster: 20)
 potential marker
potential marker
 NA
NA
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Skeletal muscle cells (cluster: 15)
 potential marker
 NA
GSE158142 (3dpf) head baseline 3dpf, untreatment Muscle cells (cluster: 16)
 potential marker
 NA
GSE123241 (wild type) neuromast baseline 5dpf, wild type during sensory hair cell regeneration, lateral line sensory Hair cells (cluster: 7)
 potential marker
 NA
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae Hair cells (cluster: 1)
 potential marker
 NA
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment Skeletal muscle cells (cluster: 1)
 potential marker
 NA
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Skeletal muscle cells (cluster: 38)
 potential marker
 NA
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo
PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
PRJNA734348 (dome, control) embryo baseline 4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
PRJNA734348 (shield, dnmt1) embryo growth 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment
GSE158142 (2dpf) head baseline 2dpf, untreatment
GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment
GSE158142 (24hpf) head baseline 24hpf, untreatment
GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment
GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood
GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated
GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl
GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih
GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/-

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