GENE ID: ENSDARG00000035798

Symbol Location Gene type Genome version Species
gngt1 19: 40856534 ~ 40859468 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000035798 (gngt1), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Pineal gland (cluster: 23)
    		 marker
    		 DOI:10.1038/nbt.4103
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Photoreceptor cells (cluster: 16)
    		 potential marker
    		 NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Retina (cluster: 11)
    		 potential marker
    		 NA
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg Rod opsin (cluster: 11)
    Rod opsin (cluster: 9)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih Rod (cluster: 5)
    		 potential marker
    		 NA
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih Rod (cluster: 2)
    Rod (cluster: 3)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment
    GSE158142 (2dpf) head baseline 2dpf, untreatment
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured
    PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR)
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-

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