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species
tissue
cell type
gene
project
dataset
NOTE: search by id.
Examples.
×
EXAMPLES:
species
Danio rerio
tissue
pituitary
cell type
Erythroid cells
gene
ENSDARG00000077809
il13
project
GSE158142
dataset
GSE158142 (20hpf)
GENE ID: ENSDARG00000004160
Symbol
Location
Gene type
Genome version
Species
reep3b
12: 8822717 ~ 8882186 (+)
protein_coding
GRCz11
Danio rerio
Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.
PPI (protein-protein interaction) results are shown above.
Green is
ENSDARG00000004160 (
reep3b
)
, yellow represents other genes.
Hover over the node can see the symbol/gene ID it represents.
The more connections, the bigger symbol size.
List of Related Genes
×
List of Related Genes
Gene ID
Symbol
Location
ENSDARG00000104372
gnb1b
6: 53304977 ~ 53334259 (-)
ENSDARG00000086490
si:dkey-92f12.2
6: 48041759 ~ 48058745 (+)
ENSDARG00000079364
CR377211.1
2: 16487443 ~ 16488660 (+)
ENSDARG00000098079
rab3gap1
9: 56336873 ~ 56399699 (-)
ENSDARG00000020239
lpin1
17: 30442518 ~ 30470271 (+)
ENSDARG00000023318
fmn2a
17: 19753559 ~ 19828505 (-)
ENSDARG00000062267
kdm3b
14: 21622154 ~ 21661015 (-)
ENSDARG00000004160
reep3b
12: 8822717 ~ 8882186 (+)
ENSDARG00000035798
gngt1
19: 40856534 ~ 40859468 (+)
ENSDARG00000089689
tex26
15: 31515976 ~ 31523117 (+)
ENSDARG00000061560
stim1b
21: 30841241 ~ 30935262 (-)
ENSDARG00000013014
or101-1
21: 40313877 ~ 40317054 (-)
ENSDARG00000009724
rpn2
11: 15225534 ~ 15297210 (-)
ENSDARG00000015546
alpl
11: 27968834 ~ 28010171 (+)
ENSDARG00000045415
gnal
24: 8904135 ~ 8973300 (+)
ENSDARG00000096603
bmb
25: 36292057 ~ 36310015 (+)
MARKER
The figure above shows the marker information in datasets of
Danio rerio
.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.
EXPRESSION
Dataset ID
Tissue / Organ
Experiment type
Sample
Cell type
Marker class
Evidence
clear
After clicking the magnifying glass button, the clustering and expression information will be displayed below.
copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences