GENE ID: ENSDARG00000070831

Symbol Location Gene type Genome version Species
rftn1a 19: 20301373 ~ 20388345 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000070831 (rftn1a), yellow represents other genes.
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    • EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain NA NA NA
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish NA NA NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment NA NA NA
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment NA NA NA
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment NA NA NA
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. NA NA NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ NA NA NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- NA NA NA
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry NA NA NA
    PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) NA NA NA
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells NA NA NA
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo NA NA NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development NA NA NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development NA NA NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos NA NA NA
    GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled) NA NA NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development NA NA NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment NA NA NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment NA NA NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver NA NA NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment NA NA NA
    GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated NA NA NA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS NA NA NA
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS NA NA NA
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae NA NA NA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days NA NA NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours NA NA NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS NA NA NA
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 NA NA NA
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis NA NA NA
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet NA NA NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) NA NA NA
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) NA NA NA
    GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells NA NA NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone NA NA NA
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases NA NA NA
    PRJNA641144 (D_INV) tumor disease adult, ZMEL1-INV cells in vitro individual culture NA NA NA
    PRJNA641144 (C_INV) tumor disease adult, ZMEL1-INV cells in vitro co-culture NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- NA NA NA
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT NA NA NA
    GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT NA NA NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/- NA NA NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- NA NA NA
    GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/- NA NA NA

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