GENE ID: ENSDARG00000095453


Symbol Location Gene type Genome version Species
si:rp71-17i16.6 23: 20340200 ~ 20345473 (-) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION


Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Endothelium (cluster: 17)
potential marker
NA
GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Epidermal cells (cluster: 15)
potential marker
NA
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Ionocyte progenitors (cluster: 6)
potential marker
NA
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Optic vesicle (cluster: 22)
potential marker
NA
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Otic (cluster: 20)
potential marker
NA
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Ciliated olfactory sensory neuron (cluster: 5)
Microvillus olfactory sensory neuron (cluster: 8)
potential marker
potential marker
NA
NA
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Ciliated olfactory sensory neuron (cluster: 1)
potential marker
NA
PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Ciliated olfactory sensory neuron (cluster: 1)
potential marker
NA
PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Pancreas endocrine cells (cluster: 5)
potential marker
NA
GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 10)
potential marker
NA
GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment
GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
GSE158142 (3dpf) head baseline 3dpf, untreatment
GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment
GSE158142 (24hpf) head baseline 24hpf, untreatment
GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver
GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl
GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC
GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC
GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-

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