Fish Single-cell RNA Database

GENE ID: ENSDARG00000067859

Symbol	Location	Gene type	Genome version	Species
scospondin	24: 40016889 ~ 40171461 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000067859 (scospondin), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000075158	igdcc3	7: 31494741 ~ 31618211 (-)
ENSDARG00000052578	c6ast4	7: 38635538 ~ 38638809 (-)
ENSDARG00000024503	c6ast3	7: 38642114 ~ 38644560 (-)
ENSDARG00000069216	c6ast1	7: 38661107 ~ 38664969 (-)
ENSDARG00000071025	dytn	6: 13096912 ~ 13133917 (+)
ENSDARG00000036558	col18a1a	9: 41821613 ~ 41979505 (+)
ENSDARG00000045175	pofut2	9: 40851088 ~ 40873934 (-)
ENSDARG00000058409	hce2l1	9: 12894578 ~ 12903567 (+)
ENSDARG00000070011	hce2l2	9: 12887491 ~ 12894091 (+)
ENSDARG00000063407	LO018340.1	16: 1254390 ~ 1321591 (+)
ENSDARG00000041554	unc93a	20: 43379029 ~ 43389475 (+)
ENSDARG00000029747	mep1a.1	20: 35473288 ~ 35481584 (+)
ENSDARG00000063242	ttc13	20: 3954579 ~ 3997531 (-)
ENSDARG00000013926	slc16a9a	17: 20653773 ~ 20666616 (-)
ENSDARG00000075707	nid2a	17: 14796926 ~ 14876758 (-)
ENSDARG00000069363	NA	13: 29404218 ~ 29406534 (-)
ENSDARG00000040110	kif20bb	12: 16452575 ~ 16479291 (+)
ENSDARG00000104687	slc16a9b	12: 7589193 ~ 7607114 (-)
ENSDARG00000077084	col28a1a	19: 25476228 ~ 25512695 (+)
ENSDARG00000073917	b3glcta	15: 31590224 ~ 31732799 (+)
ENSDARG00000005216	zgc:158328	15: 35253247 ~ 35339302 (+)
ENSDARG00000074808	megf6b	11: 41712391 ~ 41779281 (-)
ENSDARG00000028053	bmp1b	10: 40848354 ~ 40939706 (-)
ENSDARG00000068593	CU326366.2	10: 42887204 ~ 42898220 (-)
ENSDARG00000067859	scospondin	24: 40016889 ~ 40171461 (+)
ENSDARG00000098237	fbn2b	22: 4524367 ~ 4649238 (-)
ENSDARG00000086221	si:ch211-226h8.4	22: 25184459 ~ 25185570 (+)
ENSDARG00000022670	he1.3	22: 14102397 ~ 14103633 (+)
ENSDARG00000023656	he1.1	22: 14093306 ~ 14094746 (+)
ENSDARG00000019122	he1.2	22: 14098028 ~ 14099399 (+)
ENSDARG00000077357	lrrc61	25: 25737386 ~ 25747469 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment	NA	NA	NA
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated	NA	NA	NA
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000067859

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences