GENE ID: ENSDARG00000109648

Symbol Location Gene type Genome version Species
si:ch211-147m6.1 25: 13180468 ~ 13188678 (-) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Epidermal cells (cluster: 9)
 potential marker
 NA
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Myeloid cells (cluster: 7)
 potential marker
 NA
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Immune cells (cluster: 8)
 potential marker
 NA
GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry Immune cells (cluster: 5)
 potential marker
 NA
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Macrophages (cluster: 7)
 potential marker
 NA
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Macrophages (cluster: 8)
 potential marker
 NA
GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Macrophages (cluster: 8)
 potential marker
 NA
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Monocytes (cluster: 26)
 potential marker
 NA
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Monocytes (cluster: 24)
 potential marker
 NA
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Monocytes (cluster: 28)
 potential marker
 NA
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Inflammatory macrophages (cluster: 10)
Epithelialized macrophages (cluster: 3)
 potential marker
potential marker
 NA
NA
GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Neutrophils (cluster: 16)
 potential marker
 NA
PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured Macrophages (cluster: 6)
 potential marker
 NA
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Macrophages (cluster: 2)
Coronary endothelial cells (cluster: 5)
Macrophages (cluster: 6)
Macrophages (cluster: 9)
 potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Macrophages (cluster: 1)
 potential marker
 NA
PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Macrophages (cluster: 6)
 potential marker
 NA
PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured Macrophages (cluster: 5)
Macrophages (cluster: 7)
 potential marker
potential marker
 NA
NA
PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Macrophages (cluster: 2)
Macrophages (cluster: 5)
 potential marker
potential marker
 NA
NA
PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Macrophages (cluster: 2)
 potential marker
 NA
PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury Macrophages (cluster: 6)
 potential marker
 NA
PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood Macrophages (cluster: 9)
 potential marker
 NA
GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC Immune cells (cluster: 7)
 potential marker
 NA
GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC Endothelium (cluster: 6)
 potential marker
 NA
GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC Immune cells (cluster: 9)
 potential marker
 NA
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Macrophages (cluster: 15)
 potential marker
 NA
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Macrophages (cluster: 11)
 potential marker
 NA
PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Macrophages (cluster: 18)
 potential marker
 NA
PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Immune cells (cluster: 9)
 potential marker
 NA
PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Immune cells (cluster: 5)
 potential marker
 NA
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells Macrophages (cluster: 4)
 potential marker
 NA
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Macrophages (cluster: 42)
 potential marker
 NA
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Macrophages (cluster: 13)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 8)
 potential marker
 NA
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Macrophages (cluster: 7)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 7)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 10)
 potential marker
 NA
PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
GSE151354 (wild type) cartilage baseline 21dpf, wild type
GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
GSE158142 (24hpf) head baseline 24hpf, untreatment
GSE158142 (3dpf) head baseline 3dpf, untreatment
PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver
GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS
GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2
GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases
PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT

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