Gene
RNA
| Item | Value |
|---|---|
| gene id | G243709 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 1390722 ~ 1390922 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU276593 | True | 201 | lncRNA | 0.35 | 1 | 1390722 | 1390922 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_01382893_01387090 | NA | coding | upstream | 3592 | 1382749 ~ 1387130 (+) |
| CI01000057_01379483_01380217 | NA | coding | upstream | 10469 | 1378320 ~ 1380253 (+) |
| CI01000057_01361967_01364527 | NA | coding | upstream | 25774 | 1361890 ~ 1365466 (+) |
| CI01000057_01177196_01178597 | NA | coding | upstream | 212055 | 1176993 ~ 1178667 (+) |
| CI01000057_01165517_01166589 | HOXC6BA, HOXC6B, HOXC6 | coding | upstream | 223464 | 1165179 ~ 1167258 (+) |
| CI01000057_01403147_01424851 | NA | coding | downstream | 12225 | 1403147 ~ 1425333 (+) |
| CI01000057_01444461_01445905 | NA | coding | downstream | 53058 | 1443980 ~ 1446104 (+) |
| CI01000057_01451283_01464669 | NA | coding | downstream | 60361 | 1451283 ~ 1464669 (+) |
| CI01000057_01510783_01522965 | UBE2V1, UBE2V1.L, UB2V1 | coding | downstream | 119861 | 1510783 ~ 1523768 (+) |
| CI01000057_01532021_01540036 | CSNK2A1.S, CSNK2A1 | coding | downstream | 141099 | 1532021 ~ 1540095 (+) |
| G243706 | NA | non-coding | upstream | 1766 | 1388754 ~ 1388956 (+) |
| G243703 | NA | non-coding | upstream | 4615 | 1385819 ~ 1386107 (+) |
| G243700 | NA | non-coding | upstream | 7045 | 1383425 ~ 1383677 (+) |
| G243662 | NA | non-coding | upstream | 24804 | 1365537 ~ 1365918 (+) |
| G243717 | NA | non-coding | downstream | 50116 | 1441038 ~ 1441280 (+) |
| G243719 | NA | non-coding | downstream | 52607 | 1443529 ~ 1443736 (+) |
| G243723 | NA | non-coding | downstream | 59323 | 1450245 ~ 1450534 (+) |
| G243726 | NA | non-coding | downstream | 61546 | 1452468 ~ 1452685 (+) |
| G243750 | NA | non-coding | downstream | 139906 | 1530828 ~ 1531071 (+) |
| G243558 | NA | other | upstream | 432351 | 956063 ~ 958371 (+) |
| G243557 | NA | other | upstream | 435527 | 954843 ~ 955195 (+) |
| CI01000057_00417827_00418207 | NA | other | upstream | 970212 | 417700 ~ 418655 (+) |
| CI01000057_02395285_02396439 | NA | other | downstream | 1003676 | 2394598 ~ 2396561 (+) |
| G243975 | NA | other | downstream | 1185531 | 2576453 ~ 2576852 (+) |
| G243991 | NA | other | downstream | 1244315 | 2635237 ~ 2652560 (+) |
| G245231 | NA | other | downstream | 1696174 | 3087096 ~ 3292562 (+) |
| G245401 | NA | other | downstream | 2146647 | 3537569 ~ 3538442 (+) |
