CI01000057_01177196_01178597


Basic Information

Item Value
gene id CI01000057_01177196_01178597
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 1176993 ~ 1178667 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_01177196_01178597.mRNA
TTTTATATACAACCAGTGACCAGAACACAGACAGACTGAGGAACAGACGTAGAAACGGACATCTTTCATCGCGAAGTCAACACGCAAAACCTGAACTAAAAACTAGGCACATGCAAGTATGTACAGGTGCACGTATTTAATTATTTGCAATATCTGAGAGACTTTTATTTATTTATTTATTTATTCAGCCAATCTCGACCAAGATGTCAGATGAGCAGGAGGTGACGTTGCCTATCACACCACGGATGATCATGCTAGGTATGATAATTATTTGTGAGAATTCTATTACATGCAACAATTTAGCTGAAGATGCCTTTGTTTTAAAGAGTAGTCTGATGACTGCGACCCACTGGATGAAGACGACAGGTGCTACAGGAGCTCCATCCTCTAGAACCGTTCCTGAGAGTCCCGCACATCGACCTAGACCAAGATGTTGTGAGGTTATAGGAACATACTTGTTTCAAGTAATTGTTATAACTTTTGAGATAGCTATTGTTTTAAAGGATGTCACTACAGAACAGCATGACGTCACTGCAGTTCACTTAGAGTTCTTCTAATGACTCTATCATAGGCTGTAATCAAAACACAGGCAAGCTAAAATTAGAAGAGACATTAACTAAAGCATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_01177196_01178597.mRNA True 627 mRNA 0.39 3 1176993 1178667

Neighbor

gene id symbol gene type direction distance location
CI01000057_01165517_01166589 HOXC6BA, HOXC6B, HOXC6 coding upstream 9735 1165179 ~ 1167258 (+)
CI01000057_01139343_01141069 HOXC11B coding upstream 35555 1139039 ~ 1141438 (+)
CI01000057_01131299_01132358 NA coding upstream 42765 1129411 ~ 1134228 (+)
CI01000057_01115280_01118124 NA coding upstream 58684 1115280 ~ 1118309 (+)
CI01000057_01058821_01071240 RARGB, RARGA, RARG coding upstream 105605 1057536 ~ 1071388 (+)
CI01000057_01361967_01364527 NA coding downstream 183223 1361890 ~ 1365466 (+)
CI01000057_01379483_01380217 NA coding downstream 199653 1378320 ~ 1380253 (+)
CI01000057_01382893_01387090 NA coding downstream 204082 1382749 ~ 1387130 (+)
CI01000057_01403147_01424851 NA coding downstream 224480 1403147 ~ 1425333 (+)
CI01000057_01444461_01445905 NA coding downstream 265313 1443980 ~ 1446104 (+)
G243605 NA non-coding upstream 12123 1160761 ~ 1164870 (+)
G243628 NA non-coding upstream 26924 1149859 ~ 1150069 (+)
G243584 NA non-coding upstream 85337 1087351 ~ 1091656 (+)
G243574 NA non-coding upstream 175663 1001128 ~ 1001330 (+)
G243645 NA non-coding downstream 28167 1206834 ~ 1207053 (+)
G243618 NA non-coding downstream 29571 1208238 ~ 1210427 (+)
G243615 NA non-coding downstream 38035 1216702 ~ 1221552 (+)
G243656 NA non-coding downstream 103814 1282481 ~ 1283909 (+)
G243657 NA non-coding downstream 105459 1284126 ~ 1285779 (+)
G243558 NA other upstream 218622 956063 ~ 958371 (+)
G243557 NA other upstream 221798 954843 ~ 955195 (+)
CI01000057_00417827_00418207 NA other upstream 756483 417700 ~ 418655 (+)
CI01000057_02395285_02396439 NA other downstream 1215931 2394598 ~ 2396561 (+)
G243975 NA other downstream 1397786 2576453 ~ 2576852 (+)
G243991 NA other downstream 1456570 2635237 ~ 2652560 (+)
G245231 NA other downstream 1908429 3087096 ~ 3292562 (+)
G245401 NA other downstream 2358902 3537569 ~ 3538442 (+)

Expression


Co-expression Network