Gene
RNA
| Item | Value |
|---|---|
| gene id | G243628 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 1149859 ~ 1150069 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU276506 | True | 211 | lncRNA | 0.46 | 1 | 1149859 | 1150069 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_01139343_01141069 | HOXC11B | coding | upstream | 8421 | 1139039 ~ 1141438 (+) |
| CI01000057_01131299_01132358 | NA | coding | upstream | 15631 | 1129411 ~ 1134228 (+) |
| CI01000057_01115280_01118124 | NA | coding | upstream | 31550 | 1115280 ~ 1118309 (+) |
| CI01000057_01058821_01071240 | RARGB, RARGA, RARG | coding | upstream | 78471 | 1057536 ~ 1071388 (+) |
| CI01000057_00900531_00930709 | RBMS2A, RBMS2B, RBMS2 | coding | upstream | 218411 | 899354 ~ 931448 (+) |
| CI01000057_01165517_01166589 | HOXC6BA, HOXC6B, HOXC6 | coding | downstream | 15110 | 1165179 ~ 1167258 (+) |
| CI01000057_01177196_01178597 | NA | coding | downstream | 26924 | 1176993 ~ 1178667 (+) |
| CI01000057_01361967_01364527 | NA | coding | downstream | 211821 | 1361890 ~ 1365466 (+) |
| CI01000057_01379483_01380217 | NA | coding | downstream | 228251 | 1378320 ~ 1380253 (+) |
| CI01000057_01382893_01387090 | NA | coding | downstream | 232680 | 1382749 ~ 1387130 (+) |
| G243584 | NA | non-coding | upstream | 58203 | 1087351 ~ 1091656 (+) |
| G243574 | NA | non-coding | upstream | 148529 | 1001128 ~ 1001330 (+) |
| G243565 | NA | non-coding | upstream | 179187 | 970391 ~ 970672 (+) |
| G243432 | NA | non-coding | upstream | 251740 | 895395 ~ 898119 (+) |
| G243605 | NA | non-coding | downstream | 10692 | 1160761 ~ 1164870 (+) |
| G243645 | NA | non-coding | downstream | 56765 | 1206834 ~ 1207053 (+) |
| G243618 | NA | non-coding | downstream | 58169 | 1208238 ~ 1210427 (+) |
| G243615 | NA | non-coding | downstream | 66633 | 1216702 ~ 1221552 (+) |
| G243656 | NA | non-coding | downstream | 132412 | 1282481 ~ 1283909 (+) |
| G243558 | NA | other | upstream | 191488 | 956063 ~ 958371 (+) |
| G243557 | NA | other | upstream | 194664 | 954843 ~ 955195 (+) |
| CI01000057_00417827_00418207 | NA | other | upstream | 729349 | 417700 ~ 418655 (+) |
| CI01000057_02395285_02396439 | NA | other | downstream | 1244529 | 2394598 ~ 2396561 (+) |
| G243975 | NA | other | downstream | 1426384 | 2576453 ~ 2576852 (+) |
| G243991 | NA | other | downstream | 1485168 | 2635237 ~ 2652560 (+) |
| G245231 | NA | other | downstream | 1937027 | 3087096 ~ 3292562 (+) |
| G245401 | NA | other | downstream | 2387500 | 3537569 ~ 3538442 (+) |
