G243881


Basic Information

Item Value
gene id G243881
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 2312200 ~ 2312431 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU276803
CTGAAAGACTACAGAATCTCCGGATCAAAACACAGGCGAAGAAAAAGCAGAAACAAGCAATAGAATGAATCAAAACTGCCTAACGATACCAAATGAAATGTCGACCTAGGAAGAGGTACAGGACTGTGAAGCTTTGGGGGTGTTGATGAACGTGATCTACTTCATCTGTGTTGTGATCATCGTTCTGAATCTGATCCGGATGAAGTCTTTGACGCTAGCGGGGAAAGAGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU276803 True 232 lncRNA 0.44 1 2312200 2312431

Neighbor

gene id symbol gene type direction distance location
CI01000057_02244141_02246824 NA coding upstream 64571 2243793 ~ 2247724 (+)
CI01000057_02228717_02239180 NA coding upstream 72842 2227799 ~ 2239358 (+)
CI01000057_02212256_02222966 NA coding upstream 89114 2212205 ~ 2223086 (+)
CI01000057_02198818_02199189 NA coding upstream 112895 2198588 ~ 2199305 (+)
CI01000057_02168933_02179593 MMP19 coding upstream 132174 2168933 ~ 2180026 (+)
CI01000057_02347155_02370642 PUSL1 coding downstream 34724 2347155 ~ 2370664 (+)
CI01000057_02395285_02396439 NA coding downstream 82557 2394598 ~ 2396561 (+)
CI01000057_02412538_02415631 NA coding downstream 99085 2411516 ~ 2415933 (+)
CI01000057_02416295_02420310 CDA coding downstream 103864 2416295 ~ 2420542 (+)
CI01000057_02548444_02558549 NA coding downstream 235464 2547895 ~ 2559692 (+)
G243880 NA non-coding upstream 19 2311969 ~ 2312181 (+)
G243878 NA non-coding upstream 1312 2310595 ~ 2310888 (+)
G243872 NA non-coding upstream 3493 2308428 ~ 2308707 (+)
G243871 NA non-coding upstream 3947 2307771 ~ 2308253 (+)
G243869 NA non-coding upstream 5467 2306457 ~ 2306733 (+)
G243882 NA non-coding downstream 419 2312850 ~ 2313181 (+)
G243883 NA non-coding downstream 918 2313349 ~ 2313578 (+)
G243893 NA non-coding downstream 16817 2329248 ~ 2329549 (+)
G243894 NA non-coding downstream 17926 2330357 ~ 2330590 (+)
G243895 NA non-coding downstream 19484 2331915 ~ 2332134 (+)
G243558 NA other upstream 1353829 956063 ~ 958371 (+)
G243557 NA other upstream 1357005 954843 ~ 955195 (+)
CI01000057_00417827_00418207 NA other upstream 1891690 417700 ~ 418655 (+)
G243975 NA other downstream 264022 2576453 ~ 2576852 (+)
G243991 NA other downstream 322806 2635237 ~ 2652560 (+)
G245231 NA other downstream 774665 3087096 ~ 3292562 (+)
G245401 NA other downstream 1225138 3537569 ~ 3538442 (+)

Expression


Co-expression Network