CI01180000_03571292_03571611 (GNG2.L, GBG2, GNG2)


Basic Information

Item Value
gene id CI01180000_03571292_03571611
gene name GNG2.L, GBG2, GNG2
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 3569165 ~ 3573135 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_03571292_03571611.mRNA
TATATAAAAGAAACTGATACTTTTTTAGGATTTTTAGAAAGTTCAAGTCACATTTCAAATATAAATCTTTTGGGAAACACTTTATTTTAAAGTGATGTAGTTACACGTTACTACATGTACTTACTATAGTAATAACAGTAAATTATGCATAATTTCAAGTAATTAACCCTAAACCAATCCTTAACCCAAACCGTAACTCTATAGTAAGTTTGTGTAGTTGATTAATATTACTCAATACTTATTTGAGTAAGTATAATGTAACCTTAAAATAAAGTGTAACCGTATTTTGTAACATAAAAAAATGTCTTTACTGTCACTTTTGATTAATTTAATGCATTTAAAAAAAAAAAATCTTACTGATCCCAAACTTTTGAATGGTATGTGTGTGAAAAATATTATCTGGAAAATATCTTTAGTTAGTGTAATGTTGCTGTTTGAGCATAAACAACATCTGCAAAGTTATGATGCTCAAAGTTCAATGCAAAGGGAGATATTTTCTTTTACAGAATTTGCTGTTTAAGGACTACAACAAACAGCTGGTAGGGACTACAACGAGCTTCTTCCTGGGTTAGTGACATCACTAACCCTAAAATTTACATAAACCCTGCCCCCGAGAACATGCAACAAAGGGGGTGAGGCCATGTTGGGCTGCTTTAGAGAAGAGGAAGAGTTGTTGTAGTAGAGTGTTGTTGCCGTCATTTTACGCCGGACTGCTTCACAAACGAGAGTCAATTCAATGCTGGATTTGCACAAAAGATTAACATGACGGCACATGCTAGTCGATGAGTTGAATCAACTCTACAGCAACTACATAAATTTATCCACTAACCATTCAGAAACGTCCAGTTTCATTCTAAAAGTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCGACTCCGGTTTGAACAATGTAAGGCTGAACACCGTTACTGACAATCCTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCAACCGATGCGCGAGCTGTTAAAGCTCCGCCTTCTTTTGGAAAGGGGGCCGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACACAAAAACTGTGTGTTTTTGCTCACACCCAAATAGGGGCAAATTTGACAAGCTATAATAAATGATCTGTGGGGTATTTTGAGCTGAAACTTCACAGACACATTCTGGGGACACCTGAGACTTATATTNNNNNNNNNNTAAGGACTACAACAAACAGCTGGTAGGGACTACAACGAGCTTCTTCCTGGGTTAGTGACATCACTAACCCTAAAATTTACATAAACCCTGCCCCCGAGAACATGCAACAAAGGGGGTGAGGCCATGTTGGGCTGCTTTAGAGAAGAGGAAGAGTTGTTGTAGTAGAGTGTTGTTGCCGTCATTTTACGCCGGACTGCTTCACAAACGAGAGTCAATTCAATGCTGGATTTGCACAAAAGATTAACATGACGGCACATGCTAGTCGATGAGTTGAATCAACTCTACAGCAACTACATAAATTTATCCACTAACCATTCAGAAACGTCCAGTTTCATTCTAAAAGTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCGACTCCGGTTTGAACAATGTAAGGCTGAACACCGTTACTGACAATCCTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCAACCGATGCGCGAGCTGTTAAAGCTCCGCCTTCTTTTGGAAAGGGGGCCGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACACAAAAACTGTGTGTTTTTGCTCACACCCAAATAGGGGCAAATTTGACAAGCTATAATAAATGATCTGTGGGGTATTTTGAGCTGAAACTTCACAGACACATTCTGGGGACACCAGAGACTTATATTGCATCTTGTAAATGGGGTATTATAGGTCCATCTTATTTTTTATCGGTCAATAAAATAAAATAATTTGTCAATAATTAATTTATGACCAGTGTTTAGTGACAGTTAATGCACACTGACACATAACTAAACACTCTGTATCAATTTCCCTGTTTTTTTTTATCATCTTTCATCCATATGTCAAATTCACTGAATGTATTCTTCTATCTGTGTTCCAGAGCAACAGGCCTGAACCGGAAGCCTCATGGCCACCAACAACACTGCTAGCATTGCTCAGGCTCGCAGACTGGTGGAGCAGCTCAAGATGGAGGCCAATATTGACAGGATAAAGGTCTCCAAAGCAGCAGCAGATCTGACATCATACTGCGAAGCCCATGCTAAAGAGGATCCTCTGCTGTCCCCCGTGCCTGCGTCCGAGAACCCCTTCAGGGAGAAGAAGTTCTTCTGTGCCATCCTGTAACCAGCGCTGCCCATCCATGGACTCACCTGCTCCCTCTGGGACACACTCATGGACATAAAACATGTTGATCTTTTAAAAGGGCTGGAGAGATGCAGTGGAGAACCCTTAAATTCTCCCAGCTCTCTGTGAGCCTCCATTAAAGCCACTGACTCCACCTAGTGGCCTTGAGATCCAAAGCTGAGCATGGTTACAAGAATCTGTTGAAATTCGTGAGGGAGCACAGCAAAAAAAACACAAGTGACTGTCATTGTAGCAGATCAGCCAGGATGTGTTGTGAAAATATTCAAGTATTCAAAGGTTTCTGTGGTTCTGATGAGGTATTAAAATGTTTTCTTTATTGATTTTTAGTGGGCTGTGATCGTTAATCTGATCACTGATCTTAGAACCCATGGATTACTAAAGTTGCTGTGTTATTGCTTTATTTTATTTTCAATTACCTTTTTTTTCTCCAGATGGAAGTGCGATATGCCTACCATTTAGGTAGCGTTCTGTAGCCATTTGTGGGTACAGCAAAACTTTTCTTTTTTAATTTAAAGAATGACAGTTTAGTGTAATTTTCTAATGCTTGGACAGATATTCTTAAAATGAAATACCTATCTTTTAGATGCTGATAAAACTTATTTGTCGTACAGCAAACTGATTTTCTTTCTTTTTTGGTTGGGTCTTGAGCATAGTTCTCTTTTTACTCTTTGTACAAAAATGTTAGCAAGTGTGTTGTGCTATATGTTTTGAATATTTGTGGTGATATCAATAATAACTGCATGAAGCCTGACAAAGTGCCGTCTTTTTTCTTTCAAATGGTTACCACAAATCAT

Function

symbol description
gng2 Predicted to enable G-protein beta-subunit binding activity. Acts upstream of or within sprouting angiogenesis and vascular endothelial growth factor receptor signaling pathway. Located in cytosol and membrane. Is expressed in cardiovascular system and nervous system. Orthologous to human GNG2 (G protein subunit gamma 2).

GO:

id name namespace
GO:0031681 G-protein beta-subunit binding molecular_function

KEGG:

id description
K07826 GNG2; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_03571292_03571611.mRNA False 3159 mRNA 0.39 2 3569165 3572427

Neighbor

gene id symbol gene type direction distance location
CI01180000_03447461_03475999 TRIM8A coding upstream 93063 3447344 ~ 3476102 (+)
CI01180000_03425920_03442839 SUFU.L, SUFU coding upstream 124982 3425514 ~ 3444183 (+)
CI01180000_03286578_03289266 NA coding upstream 279862 3286063 ~ 3289303 (+)
CI01180000_03280581_03284614 NA coding upstream 284544 3280348 ~ 3284621 (+)
CI01180000_03250547_03255754 KLHDC3 coding upstream 313297 3250547 ~ 3255868 (+)
CI01180000_03590508_03607430 GABRA2 coding downstream 18081 3590508 ~ 3607775 (+)
CI01180000_03610257_03623051 GABRG1 coding downstream 36993 3609420 ~ 3624142 (+)
CI01180000_03663974_03689344 GABRB1 coding downstream 91009 3663436 ~ 3689472 (+)
CI01180000_03701881_03732121 ATP10D coding downstream 129042 3701469 ~ 3732123 (+)
CI01180000_03741295_03752345 DAPP1 coding downstream 168069 3740496 ~ 3752640 (+)
G680805 NA non-coding upstream 18882 3550021 ~ 3550283 (+)
G680743 NA non-coding upstream 44739 3517625 ~ 3524426 (+)
G680797 NA non-coding upstream 66817 3502109 ~ 3502348 (+)
G680767 NA non-coding upstream 108196 3449085 ~ 3460969 (+)
G680706 NA non-coding upstream 180592 3388288 ~ 3388573 (+)
G680815 NA non-coding downstream 31620 3604047 ~ 3604618 (+)
G680816 NA non-coding downstream 32321 3604748 ~ 3605105 (+)
G680823 NA non-coding downstream 67640 3640067 ~ 3640356 (+)
G680824 NA non-coding downstream 69033 3641460 ~ 3641755 (+)
G680825 NA non-coding downstream 69460 3641887 ~ 3642106 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other upstream 873729 2689271 ~ 2693221 (+)
G679324 NA other upstream 1171805 2388867 ~ 2397360 (+)
G679076 NA other upstream 1769732 1795170 ~ 1799433 (+)
G678946 NA other upstream 2013014 1518353 ~ 1612547 (+)
G678637 NA other upstream 2413493 1149551 ~ 1155672 (+)
G680736 NA other downstream 193264 3765691 ~ 3784441 (+)
G681137 NA other downstream 1210878 4783305 ~ 4785631 (+)
G681268 NA other downstream 1797983 5370410 ~ 5373762 (+)
G681592 NA other downstream 2900608 6471995 ~ 6478999 (+)
G681686 NA other downstream 3060481 6632908 ~ 6634989 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G201795 gbg2,gng2,LOC108239039,LOC106603227 non-coding NC_053131.1 CM020928.1 11310115 ~ 11312327 (-)
eurasian perch (Perca fluviatilis) G43938 NA non-coding NC_053115.1 CM020912.1 35404132 ~ 35404347 (-)