G678773


Basic Information

Item Value
gene id G678773
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 1118289 ~ 1118645 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU799434
AAGTCAGAATTGCAAGATATAAAGTCAGAATTGCAAGATATAAAGTCAGAATTGCGTGATATATAGTCAGAATTGTGAGATATAAAGTCAGAATTGCGTGATATAAAGTCAGAATTGTGTGATATAAAGTCAGAATTGTGAGATATAAAGTCAGAATTGCGTGATATAAAGTCAGAATTGCGAGATATAAAGTCAGAATTGCGAGATATAAAGTCAGAATTGCGAGATATAAAGTCAGAATTGTGAGATATAAAGTCAGAATTGAGAGATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU799434 True 273 lncRNA 0.31 2 1118289 1118645

Neighbor

gene id symbol gene type direction distance location
CI01180000_00955725_01050852 SIPA1L2 coding upstream 66463 954922 ~ 1051826 (+)
CI01180000_00947514_00949868 NA coding upstream 167383 946421 ~ 950906 (+)
CI01180000_00862066_00867985 NA coding upstream 250177 860746 ~ 868112 (+)
CI01180000_00812535_00858607 NA coding upstream 259284 811857 ~ 859005 (+)
CI01180000_00765917_00776252 NA coding upstream 341378 765797 ~ 776911 (+)
CI01180000_01196818_01224406 EGLN1B, EGLN1, EGLN1A coding downstream 78141 1196786 ~ 1224915 (+)
CI01180000_01372608_01374455 NA coding downstream 252116 1370761 ~ 1374547 (+)
CI01180000_01380859_01385445 NA coding downstream 262056 1380701 ~ 1385783 (+)
CI01180000_01492241_01493781 NA coding downstream 373026 1491671 ~ 1494446 (+)
CI01180000_01542059_01545609 GGPS1 coding downstream 423414 1542059 ~ 1546080 (+)
G678641 NA non-coding upstream 1797 1111203 ~ 1116492 (+)
G678649 NA non-coding upstream 27438 1040385 ~ 1090851 (+)
G678639 NA non-coding upstream 210907 902610 ~ 907382 (+)
G678638 NA non-coding upstream 235261 880016 ~ 883028 (+)
G678736 NA non-coding upstream 240691 877352 ~ 877598 (+)
G678775 NA non-coding downstream 7293 1125938 ~ 1126610 (+)
G678631 NA non-coding downstream 37677 1156322 ~ 1159139 (+)
G678646 NA non-coding downstream 54990 1173635 ~ 1177276 (+)
G678819 NA non-coding downstream 120162 1238807 ~ 1239064 (+)
G678820 NA non-coding downstream 120932 1239577 ~ 1239963 (+)
G678751 NA other upstream 52198 1059843 ~ 1066091 (+)
G678440 NA other upstream 966637 147934 ~ 151652 (+)
G678637 NA other downstream 30906 1149551 ~ 1155672 (+)
G678946 NA other downstream 399708 1518353 ~ 1612547 (+)
G679076 NA other downstream 676525 1795170 ~ 1799433 (+)
G679324 NA other downstream 1270222 2388867 ~ 2397360 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other downstream 1571117 2689271 ~ 2693221 (+)

Expression


Co-expression Network