CI01180000_01492241_01493781


Basic Information

Item Value
gene id CI01180000_01492241_01493781
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 1491671 ~ 1494446 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_01492241_01493781.mRNA
ACTATAAAAAGAACTTAATCAATATGTAAAAGAACAGCATCAGTACACATTATAAGGGCCCCAATGATAGCATTTCGCCATATTGCTGTATAATTTCTGTAAAATTCAGTTTAAAACAGTTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCGACTCCGGTTTGAACAATGTAAGGCTGAACACCGTTACTGACAATCCTCATTTTGGCTGCATGAGATTCTCCAGCTTTGTTTGTTGAGCAACCGAAGCGTGAGCTGTTAAAGTTCCGCCCTCTTCTGGAAAGGGGTCTGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACACAAAAACTGCATGTTTTTGCTCACACCCAAATAGGGGCAAATTTGACAAGCTATAATAAATGATCTGTGGGGTATTTTGAGCTGAAACTTCACAGACACATTCTGAGGACACCAGAGACTTATATTACATCTTGTGAAAGGGGCATTATAGGTCCCCTTTAATGAGATTCACCCACTTAAATGTGAGTTAATGACCTACTGGCAGACTTTCTCAATCCCAATTCTTCATTTGCATATTCAAAATGGCATTAGATGAGAACAAATCTTTGACATTATGGCCCAACAGCTGTGAAGGTTCCCAGCTAGATGGTCACAAACTCTCTCAGTCTCCAATAGAAACAGTGGCGCTGCCAAAGAGTGAAGTACCCAGCCTGCTCTGCTCCGCTGCCCCATCCTGTGGCTCTCAGCCTGACGGGGCATCAGCAGACACGGCACAGATGTTCATTAACATCACACAAACAGCCCTGACAATCTGCTCTTAGATGACTGCCATCAGTCCTCACGCGGTCCAGAGAAACAGAGAAACAACAGTCAGCGGCAACGTGCAGCTCTACGGACGCCGTCACTCTCCAATGAAGCAAGAGATACTGACAGAAAACAACAACAAAACACTTTGAGAACAGGAATTCCTCCTACATTTAAAGATGAAGTGTGTCATTTCCATACTGTGCACAGAATGTGAATTATCTATATGCATGAAATACCCAGATGACCTTCTAACAAGTGCGAAAATGTGCAATCTGAGCACACTGTGCGTAATAGTGCATCCCACAATCCAATGTGTTCAACATGACTTTTTTCATTTTTAAACAATGAAGCTACTTTAATGATACTTGGTTATGTTTATCCTTGCATAATGCATACTACATATGAAGCAAACTAGTACTATTACTATAGCACTAAAAGTACATTAATATTTCATTTCAAACTGTAAAAAAAAATGTTTTGCAAATAAAACAAAGATTATTAGAGCATGTTTTACATGCTTTTCAGTCTTTCTACTTTAAAATTTCAAGTTAAATTCAATTTTATTTTGAGTTTCTTTGAAATGTTTGTGAAATTTACTAGCGATTTCTGAATGAAAATTGTTTCTGCACTCAATTTTTTGCAGTGTTCCGTTTATAAATGGTACAGTTGTCTCAGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_01492241_01493781.mRNA True 1475 mRNA 0.39 2 1491671 1494446

Neighbor

gene id symbol gene type direction distance location
CI01180000_01380859_01385445 NA coding upstream 105888 1380701 ~ 1385783 (+)
CI01180000_01372608_01374455 NA coding upstream 117124 1370761 ~ 1374547 (+)
CI01180000_01196818_01224406 EGLN1B, EGLN1, EGLN1A coding upstream 266756 1196786 ~ 1224915 (+)
CI01180000_00955725_01050852 SIPA1L2 coding upstream 439845 954922 ~ 1051826 (+)
CI01180000_00947514_00949868 NA coding upstream 540765 946421 ~ 950906 (+)
CI01180000_01542059_01545609 GGPS1 coding downstream 47613 1542059 ~ 1546080 (+)
CI01180000_01576739_01578505 GNG4 coding downstream 82293 1576739 ~ 1579406 (+)
CI01180000_01747067_01755038 GPR137B coding downstream 252621 1747067 ~ 1755257 (+)
CI01180000_01828938_01830221 DNAJC12 coding downstream 334492 1828938 ~ 1830814 (+)
CI01180000_01832263_01834405 COX5B.2, COX5B2, COX5B coding downstream 337567 1832013 ~ 1834999 (+)
G678869 NA non-coding upstream 58808 1431965 ~ 1432863 (+)
G678929 NA non-coding upstream 59930 1431505 ~ 1431741 (+)
G678868 NA non-coding upstream 60704 1429873 ~ 1430967 (+)
G678928 NA non-coding upstream 63332 1428052 ~ 1428339 (+)
G678891 NA non-coding upstream 134079 1349918 ~ 1357592 (+)
G678946 NA non-coding downstream 23907 1518353 ~ 1612547 (+)
G678948 NA non-coding downstream 96726 1591172 ~ 1593047 (+)
G678945 NA non-coding downstream 212069 1706515 ~ 1707619 (+)
G678942 NA non-coding downstream 232715 1727161 ~ 1733717 (+)
G679064 NA non-coding downstream 240971 1735417 ~ 1735761 (+)
G678637 NA other upstream 335999 1149551 ~ 1155672 (+)
G678751 NA other upstream 425580 1059843 ~ 1066091 (+)
G678440 NA other upstream 1340019 147934 ~ 151652 (+)
G679076 NA other downstream 300724 1795170 ~ 1799433 (+)
G679324 NA other downstream 894421 2388867 ~ 2397360 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other downstream 1195316 2689271 ~ 2693221 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other downstream 2058831 3569165 ~ 3573135 (+)

Expression


Co-expression Network