G678891


Basic Information

Item Value
gene id G678891
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 1349918 ~ 1357592 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU799569
GCCCGGAGCTGATGGACAGGAATAGCTCGTCTCAAATCCCAGCCTCCCCCACGGCAGTGTTATCTGACATCAACAACCGCTCAACAGCAAACGTCCCGCAGCTATTTTAAGCCACATTCTAAGTGTTATCTCGTCAAATCAGTCATTCCCAGGATCTGCATCCACATATTCCAGAAGAACGGGACTGCGTGTTCAGTCTGAGCAGCATAAACAGGAATGAGGTCAGATGCATCTGCTTGAGCTCCGTGATGTTTGGTTTCGCAGACTTTGTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU799569 True 274 lncRNA 0.50 3 1349918 1357592

Neighbor

gene id symbol gene type direction distance location
CI01180000_01196818_01224406 EGLN1B, EGLN1, EGLN1A coding upstream 125003 1196786 ~ 1224915 (+)
CI01180000_00955725_01050852 SIPA1L2 coding upstream 298092 954922 ~ 1051826 (+)
CI01180000_00947514_00949868 NA coding upstream 399012 946421 ~ 950906 (+)
CI01180000_00862066_00867985 NA coding upstream 481806 860746 ~ 868112 (+)
CI01180000_00812535_00858607 NA coding upstream 490913 811857 ~ 859005 (+)
CI01180000_01372608_01374455 NA coding downstream 13169 1370761 ~ 1374547 (+)
CI01180000_01380859_01385445 NA coding downstream 23109 1380701 ~ 1385783 (+)
CI01180000_01492241_01493781 NA coding downstream 134079 1491671 ~ 1494446 (+)
CI01180000_01542059_01545609 GGPS1 coding downstream 184467 1542059 ~ 1546080 (+)
CI01180000_01576739_01578505 GNG4 coding downstream 219147 1576739 ~ 1579406 (+)
G678838 NA non-coding upstream 31664 1259352 ~ 1318254 (+)
G678832 NA non-coding upstream 46089 1250996 ~ 1303829 (+)
G678853 NA non-coding upstream 46190 1288700 ~ 1303728 (+)
G678848 NA non-coding upstream 72483 1276554 ~ 1277435 (+)
G678827 NA non-coding upstream 101474 1248146 ~ 1248444 (+)
G678928 NA non-coding downstream 70460 1428052 ~ 1428339 (+)
G678868 NA non-coding downstream 72281 1429873 ~ 1430967 (+)
G678929 NA non-coding downstream 73913 1431505 ~ 1431741 (+)
G678869 NA non-coding downstream 74373 1431965 ~ 1432863 (+)
G678946 NA non-coding downstream 160761 1518353 ~ 1612547 (+)
G678637 NA other upstream 194246 1149551 ~ 1155672 (+)
G678751 NA other upstream 283827 1059843 ~ 1066091 (+)
G678440 NA other upstream 1198266 147934 ~ 151652 (+)
G679076 NA other downstream 437578 1795170 ~ 1799433 (+)
G679324 NA other downstream 1031275 2388867 ~ 2397360 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other downstream 1332170 2689271 ~ 2693221 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other downstream 2195685 3569165 ~ 3573135 (+)

Expression


Co-expression Network