CI01180000_01372608_01374455


Basic Information

Item Value
gene id CI01180000_01372608_01374455
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 1370761 ~ 1374547 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_01372608_01374455.mRNA
ACTATAAAACGAGTGTGCATGCTAAAACGTGTGCCATGCTTTTTGGGTTCACTGAAGTGTGTCAAGTGAACCCACTGACACAATGTCATTCTACCCTGCGTTTCCAAGTGCAGACAGTCTGTAAAACCTCTTTTCCTTCTTTTGATTGGCTGTAAATTTCTCAGGAAATGGTAACCATAGCAACCCCTGCGCTCACCAGGATAGCCCCACTGACAAGCAACATCCTGTTTACTGTGTTGCTATTTTTTCTCTCCAGCTCATGAATTCAACTGAGAATCGTAACTCGCAGCAGAAACAGTCTGTTGTACAACAGCCTCAGTTTTGTGATTACTAACCCATCTACAGTCTGTACATGCTGTACATTATTGCACATGCTTCAATATAACATTAATATAACATATCATTGATTGATTGATTTCACAAAGAGGAGAATATTCACTTGCAAAACAGCCAGAAATAGCCTGATTTTTTTTGCATACCACCCCACTACTGTATTGTGTATTGTATTTTCTGCATTTAGCAGACGCTTTTATACAAAGTGACTTACAACAATCTGTACATAATGTGTACATATTGACTTATATATTGTATGTTGATATGTACTTGATTCTTTTGATAAAGTACATATAAAGTATAATAAATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTGTCAAATTGATTAATCATGAGTAATTGCATCTAACAAAAATACATGTGAGTGCTGTCAAATCAATCGCGATTAATCACATAACATAAGTTTGTAAATATATATATTTACATACATAAATGCATATATACATATATAAATAGATATATAAACTTATGTTAGATGCGATTAATCACGATTAATTGATTTGACAGCACTCACACATATTTTGTTAGATGCAATTACTCATGAATAATCAATTGACAGTACACACACACTTATGTTAGATACAATTACTCATTTGACAACACACACAAACTTGTTAGATGCGATTAATCGATTTAACAGCATATATATATATATATATATATATATATATATATATACATACATATATACACACATATACACACACACACACCATTTGTGTTAGATGCGATTACTCATGATCAGTCGATTTGACAGCACATAAATACAAACTTTTGTTGTGATTAATCGCGATTAATCGATTTAATAGTACGTATATATATACACACACACACAATTGCTAGATGCGATTATTCATGATTAATCGATTTGACAGCACATATACAGACACTTGTTAGATGTGATTAATCGTAATTGATCGATTTAATAGCACATATATATATATTATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATATATATATATATTATACACACACACACACACACTTACAAACTTAGATGTGATTAATTGTGATTAATTGATTTGACAGCACTAACACACACACAGAGACACAAATACTCCAACTTGAAACTGATTTGCTTTGATAAATTACTAATAACAAAATTATGCACACTCAAAACAGTAAGTCATATATTCATCTGGTTGTAATGAACCATTTGCGCTATATTGACAAAAAATTACTCATTGGAGCATTCTCACTTTGTCGGTGCAAACGGCAAACATTTCGTGACATCGGGGAGGTAGAAGAGCAATTATAAAATGGAGGAATTTAGTCAAAATGGAGGGCCTGAGAGAGGAGCAGAAAAAAATGTGCTCGGCGTCTGGAATCTGGGGGCTGGAGGCTGCAGAGGTGATGTCATTGGAGCAGAGGAGCTGGGAGAAAAACAAGTCTCTTTCTTTATTCAGATCCTCTTTGCAGTCCCAGCAGGGGTGGGAGGGGAGGGGAAGGGAGGGCGGCTTGGCAGGCGGCCGTGGCAGGGGCTGCTGGGAAATGGTAAAGGATGCCAAGCAGGCTCTGCAGCCAACATTAGTGGCTCACATCTTTGTTCTCTGAAACCTGGTGTGCTGCCAAAAGCCTCATTTCAGTTCCCCGCCATGATTACACTGGATGTAGGCCAATTCCTGAGAGCTCGCAATCCTCTCTGTTGCTCTCGCTCTCCTTCAAAGGCTCGCTGCCAAACATGCAGCAGTTTCCATGGCGACGGCGAGCGGAACATAAAAGCGTATTGTTATGCATGTGCACTCAATAATGTTCATTTATCTCTACCGAAAAACACTTTCATTATCGGCTATGATATTACTGACCACAAGTCAGTTCATCCATAAAGTCATGATGCAAGTAGCTTTTCCCGACTATGAACACCTGACAGTCAGACAGAGTAAAATAATCTTAAGTGAAAGAATGTGCTTATATTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_01372608_01374455.mRNA True 2506 mRNA 0.34 2 1370761 1374547

Neighbor

gene id symbol gene type direction distance location
CI01180000_01196818_01224406 EGLN1B, EGLN1, EGLN1A coding upstream 145846 1196786 ~ 1224915 (+)
CI01180000_00955725_01050852 SIPA1L2 coding upstream 318935 954922 ~ 1051826 (+)
CI01180000_00947514_00949868 NA coding upstream 419855 946421 ~ 950906 (+)
CI01180000_00862066_00867985 NA coding upstream 502649 860746 ~ 868112 (+)
CI01180000_00812535_00858607 NA coding upstream 511756 811857 ~ 859005 (+)
CI01180000_01380859_01385445 NA coding downstream 6154 1380701 ~ 1385783 (+)
CI01180000_01492241_01493781 NA coding downstream 117124 1491671 ~ 1494446 (+)
CI01180000_01542059_01545609 GGPS1 coding downstream 167512 1542059 ~ 1546080 (+)
CI01180000_01576739_01578505 GNG4 coding downstream 202192 1576739 ~ 1579406 (+)
CI01180000_01747067_01755038 GPR137B coding downstream 372520 1747067 ~ 1755257 (+)
G678891 NA non-coding upstream 13169 1349918 ~ 1357592 (+)
G678838 NA non-coding upstream 52507 1259352 ~ 1318254 (+)
G678832 NA non-coding upstream 66932 1250996 ~ 1303829 (+)
G678853 NA non-coding upstream 67033 1288700 ~ 1303728 (+)
G678848 NA non-coding upstream 93326 1276554 ~ 1277435 (+)
G678928 NA non-coding downstream 53505 1428052 ~ 1428339 (+)
G678868 NA non-coding downstream 55326 1429873 ~ 1430967 (+)
G678929 NA non-coding downstream 56958 1431505 ~ 1431741 (+)
G678869 NA non-coding downstream 57418 1431965 ~ 1432863 (+)
G678946 NA non-coding downstream 143806 1518353 ~ 1612547 (+)
G678637 NA other upstream 215089 1149551 ~ 1155672 (+)
G678751 NA other upstream 304670 1059843 ~ 1066091 (+)
G678440 NA other upstream 1219109 147934 ~ 151652 (+)
G679076 NA other downstream 420623 1795170 ~ 1799433 (+)
G679324 NA other downstream 1014320 2388867 ~ 2397360 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other downstream 1315215 2689271 ~ 2693221 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other downstream 2178730 3569165 ~ 3573135 (+)

Expression


Co-expression Network