G678928


Basic Information

Item Value
gene id G678928
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 1428052 ~ 1428339 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU799606
AATGAGTACACCCCACAACAAAAACTACTATATCTAGTACTTTGTATGGCCTCCATGATTTTTAATGACAGCACCAAGTCTTCTAGGCATGGAATGAACAAGTTGGCGACATTTTGCAACATCTCTCTTTTTCCATTCTTCAAGAATGACCTCTTTTAGAGACTGGATGCTGGATGGAGAGTGATGCTCAACTTGTCTCTTCAGAATTCCCCATAGGTGTTCGATTGGGTTCAGATCAGGAGCCACTGAATCACTTTCACCCTGTTCTTCTTCAGAAATGTGTTTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU799606 True 288 lncRNA 0.41 1 1428052 1428339

Neighbor

gene id symbol gene type direction distance location
CI01180000_01380859_01385445 NA coding upstream 42269 1380701 ~ 1385783 (+)
CI01180000_01372608_01374455 NA coding upstream 53505 1370761 ~ 1374547 (+)
CI01180000_01196818_01224406 EGLN1B, EGLN1, EGLN1A coding upstream 203137 1196786 ~ 1224915 (+)
CI01180000_00955725_01050852 SIPA1L2 coding upstream 376226 954922 ~ 1051826 (+)
CI01180000_00947514_00949868 NA coding upstream 477146 946421 ~ 950906 (+)
CI01180000_01492241_01493781 NA coding downstream 63332 1491671 ~ 1494446 (+)
CI01180000_01542059_01545609 GGPS1 coding downstream 113720 1542059 ~ 1546080 (+)
CI01180000_01576739_01578505 GNG4 coding downstream 148400 1576739 ~ 1579406 (+)
CI01180000_01747067_01755038 GPR137B coding downstream 318728 1747067 ~ 1755257 (+)
CI01180000_01828938_01830221 DNAJC12 coding downstream 400599 1828938 ~ 1830814 (+)
G678891 NA non-coding upstream 70460 1349918 ~ 1357592 (+)
G678838 NA non-coding upstream 109798 1259352 ~ 1318254 (+)
G678832 NA non-coding upstream 124223 1250996 ~ 1303829 (+)
G678853 NA non-coding upstream 124324 1288700 ~ 1303728 (+)
G678848 NA non-coding upstream 150617 1276554 ~ 1277435 (+)
G678868 NA non-coding downstream 1534 1429873 ~ 1430967 (+)
G678929 NA non-coding downstream 3166 1431505 ~ 1431741 (+)
G678869 NA non-coding downstream 3626 1431965 ~ 1432863 (+)
G678946 NA non-coding downstream 90014 1518353 ~ 1612547 (+)
G678948 NA non-coding downstream 162833 1591172 ~ 1593047 (+)
G678637 NA other upstream 272380 1149551 ~ 1155672 (+)
G678751 NA other upstream 361961 1059843 ~ 1066091 (+)
G678440 NA other upstream 1276400 147934 ~ 151652 (+)
G679076 NA other downstream 366831 1795170 ~ 1799433 (+)
G679324 NA other downstream 960528 2388867 ~ 2397360 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other downstream 1261423 2689271 ~ 2693221 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other downstream 2124938 3569165 ~ 3573135 (+)

Expression


Co-expression Network