Gene
RNA
| Item | Value |
|---|---|
| gene id | G678838 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 1259352 ~ 1318254 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU799508 | False | 555 | lncRNA | 0.44 | 2 | 1259352 | 1318254 |
| TU799507 | True | 273 | lncRNA | 0.43 | 2 | 1286868 | 1318254 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_01196818_01224406 | EGLN1B, EGLN1, EGLN1A | coding | upstream | 34437 | 1196786 ~ 1224915 (+) |
| CI01180000_00955725_01050852 | SIPA1L2 | coding | upstream | 207526 | 954922 ~ 1051826 (+) |
| CI01180000_00947514_00949868 | NA | coding | upstream | 308446 | 946421 ~ 950906 (+) |
| CI01180000_00862066_00867985 | NA | coding | upstream | 391240 | 860746 ~ 868112 (+) |
| CI01180000_00812535_00858607 | NA | coding | upstream | 400347 | 811857 ~ 859005 (+) |
| CI01180000_01372608_01374455 | NA | coding | downstream | 52507 | 1370761 ~ 1374547 (+) |
| CI01180000_01380859_01385445 | NA | coding | downstream | 62447 | 1380701 ~ 1385783 (+) |
| CI01180000_01492241_01493781 | NA | coding | downstream | 173417 | 1491671 ~ 1494446 (+) |
| CI01180000_01542059_01545609 | GGPS1 | coding | downstream | 223805 | 1542059 ~ 1546080 (+) |
| CI01180000_01576739_01578505 | GNG4 | coding | downstream | 258485 | 1576739 ~ 1579406 (+) |
| G678827 | NA | non-coding | upstream | 10908 | 1248146 ~ 1248444 (+) |
| G678826 | NA | non-coding | upstream | 11393 | 1247708 ~ 1247959 (+) |
| G678820 | NA | non-coding | upstream | 19389 | 1239577 ~ 1239963 (+) |
| G678819 | NA | non-coding | upstream | 20288 | 1238807 ~ 1239064 (+) |
| G678646 | NA | non-coding | upstream | 82076 | 1173635 ~ 1177276 (+) |
| G678891 | NA | non-coding | downstream | 31664 | 1349918 ~ 1357592 (+) |
| G678928 | NA | non-coding | downstream | 109798 | 1428052 ~ 1428339 (+) |
| G678868 | NA | non-coding | downstream | 111619 | 1429873 ~ 1430967 (+) |
| G678929 | NA | non-coding | downstream | 113251 | 1431505 ~ 1431741 (+) |
| G678869 | NA | non-coding | downstream | 113711 | 1431965 ~ 1432863 (+) |
| G678637 | NA | other | upstream | 103680 | 1149551 ~ 1155672 (+) |
| G678751 | NA | other | upstream | 193261 | 1059843 ~ 1066091 (+) |
| G678440 | NA | other | upstream | 1107700 | 147934 ~ 151652 (+) |
| G678946 | NA | other | downstream | 200099 | 1518353 ~ 1612547 (+) |
| G679076 | NA | other | downstream | 476916 | 1795170 ~ 1799433 (+) |
| G679324 | NA | other | downstream | 1070613 | 2388867 ~ 2397360 (+) |
| CI01180000_02690045_02691641 | NKX6-2, NKX6-2.L, NKX6.2 | other | downstream | 1371508 | 2689271 ~ 2693221 (+) |
| CI01180000_03571292_03571611 | GNG2.L, GBG2, GNG2 | other | downstream | 2235023 | 3569165 ~ 3573135 (+) |
