G680825


Basic Information

Item Value
gene id G680825
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 3641887 ~ 3642106 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU801742
AGCCCTTTGAAGCTGCACTGAAACTGCAATTTGGACCTTCAACCCGCAATCAACTGAAATAACATCAAAATTGTGAGACATAAAGTCACAATCATTATAAAGTCAATTAATAGAAATAAAAGTCACAATTAGGAGAAATAAAGTTGTAATTAAAATAAATAAAGTTACAATTAATAGTAATAAAGTTGTAACTGTGAAAAAGTTGCAATTAAGAGAAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU801742 True 220 lncRNA 0.28 1 3641887 3642106

Neighbor

gene id symbol gene type direction distance location
CI01180000_03610257_03623051 GABRG1 coding upstream 17745 3609420 ~ 3624142 (+)
CI01180000_03590508_03607430 GABRA2 coding upstream 34112 3590508 ~ 3607775 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 coding upstream 69460 3569165 ~ 3573135 (+)
CI01180000_03447461_03475999 TRIM8A coding upstream 165785 3447344 ~ 3476102 (+)
CI01180000_03425920_03442839 SUFU.L, SUFU coding upstream 197704 3425514 ~ 3444183 (+)
CI01180000_03663974_03689344 GABRB1 coding downstream 21330 3663436 ~ 3689472 (+)
CI01180000_03701881_03732121 ATP10D coding downstream 59363 3701469 ~ 3732123 (+)
CI01180000_03741295_03752345 DAPP1 coding downstream 98390 3740496 ~ 3752640 (+)
CI01180000_03757478_03765413 RRH coding downstream 113584 3755690 ~ 3765666 (+)
CI01180000_03798341_03812950 METAP1, AMPM1 coding downstream 155668 3797774 ~ 3813051 (+)
G680824 NA non-coding upstream 132 3641460 ~ 3641755 (+)
G680823 NA non-coding upstream 1531 3640067 ~ 3640356 (+)
G680816 NA non-coding upstream 36782 3604748 ~ 3605105 (+)
G680815 NA non-coding upstream 37269 3604047 ~ 3604618 (+)
G680831 NA non-coding downstream 10632 3652738 ~ 3653016 (+)
G680721 NA non-coding downstream 32186 3674292 ~ 3825843 (+)
G680728 NA non-coding downstream 186226 3828332 ~ 3830556 (+)
G680768 NA non-coding downstream 201753 3843859 ~ 3844579 (+)
G680856 NA non-coding downstream 225955 3868061 ~ 3868454 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other upstream 946451 2689271 ~ 2693221 (+)
G679324 NA other upstream 1244527 2388867 ~ 2397360 (+)
G679076 NA other upstream 1842454 1795170 ~ 1799433 (+)
G678946 NA other upstream 2085736 1518353 ~ 1612547 (+)
G680736 NA other downstream 123585 3765691 ~ 3784441 (+)
G681137 NA other downstream 1141199 4783305 ~ 4785631 (+)
G681268 NA other downstream 1728304 5370410 ~ 5373762 (+)
G681592 NA other downstream 2830929 6471995 ~ 6478999 (+)
G681686 NA other downstream 2990802 6632908 ~ 6634989 (+)

Expression


Co-expression Network