XLOC_016297 (frrs1a)


Basic Information

Item Value
gene id XLOC_016297
gene name frrs1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 20444477 ~ 20470140 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032127
ATGTGTACCCTACAAACAGCTCTGGTGATTCTTGCGGCTTTATGTTTTACTGTTATAAATGGGTACAAAAATGGAAAGGTGCAGAAAGCTTGTGAAAGCATGATGCCAGAACATCACAGCCAGCCCAACACAACAGCCAGTCCATACACACTGACTGTGAATGCCAGTAAATTCAGCCCAGGGGACAACATCAGAGTCACTCTCTCTGGAAGTGAGCCTTTTGAGGGCTTTCTAATTCAGGCCAGAGATGCCACTAACCTTGATGGATTAGCTATCGGATCTTTCACACTGGTCAATCTGAAGATTTCTCAGCGATTGACATGCAACGGTATAGAGGGTTCTGCTGTTAGTCACACAAGTGATGTCAAAAAGAGAGAAATTGAGGTGATCTGGAAAGCTCCATCCAATTCTCCTCTTGCTGTTCAGTTTCTCGCCACAGTTCTTGCTCACTACAAAGTTTTCTGGCTCAAACTTCGTGGTCCTGTGATAACTCATGGTGATGCGACTCCTGCTCCACCTCAGTCCACCACTCCAGTATGTGGCAAAATACAAACTACCCATCTTTCACAATTCAGCTCAGATGGATGTGGCAGGCAGAAGACTTGTCTCCTTGACCCTGTCGGCTGTAACCCTTCTGTAGACACAAACTGCTTTTACCTCGCTTATTCTACTTCGGGGCAGACGGTTTCATTTGAGCTCAGTGGACCTGCACAGGGATATGTCTCCTTCGCTCTGTCTAGTGATAAATGGATGGGTGATGATgatgtatatttgtgtgtatatgacGGTGGTCGAGTGAGTGTGGAAGCAGCTTACACTACAGGCAGGACATATCCAAAGGTGTCATCGCAGTCGGTGCTGATGGATGTAGGCTGGAGAGTTTCAGATGGGATCATTCAGTGCAAGTTCTCCCGATCCATCTACACCCCACAGGACCCGGAGCGCTTCAGTCTGAACAACAGCTACTACCTCTTCATAGCACACGGCAGTGCAGAATATGGTATGATCCACAGACACACGCGGCAGCCACTGATATCGTCCCATCATCAGGTCATTATCGGCCCTCCTGTGATACTGACAGGCTCTCGTTCTCCTCTTCTCATGAAATACCATGGAGCTTTAATGCTGATTGCCTGGATGCTAGCAGGAAGCACTGGGACTTTAATGGCGGGCTATTTTAAACCTGACTGGCCTGAACAAACACTGTTTGGACAAAAAATATGGTTTCAGGTCCACAGAATGTTGATGTCCCTTACAGTTTTACTCACATCTGTGGGCTTCATTGTCCCCTTTATCTACAGAGGAAAATGGAGCACAAGAGCGGGTGCTCATCCGTACCTGGGCTGCACTGTTATGATCCTGGCTTTCTGTCAGCCTTTAATGGCTGCATTCAGACCAGCTCCAGACTCCCCAAGGAGGTGGATATTCAACTGGCTGCACTGGGGTGTTGGAAATGCTGCTGAAATTATTGCTGTGGGTTCCATATTCTTGGGAATAAAGCAACAGTCTCTTTTACTGCCATATCCGTGGACCACAGGGATtctctctgcttttgtggtttggACAATTGTGTTAAAGCTGGTTTTGCAACTTCATAAGCATGGTGTTATTAGAAAAGGTTTATTGTCTGTCCTTGCCATTTTTGTGCTTGGAAACTCAGCATTCTGTATCTCACTGCTCGCTGCCATCGGGAACATATAG
>TCONS_00032128
TTACTTTTGCTGGAAATGTGTACCCTACAAACAGCTCTGGTGATTCTTGCGGCTTTATGTTTTACTGTTATAAATGGGTACAAAAATGGAAAGGTGCAGAAAGCTTGTGAAAGCATGATGCCAGAACATCACAGCCAGCCCAACACAACAGCCAGTCCATACACACTGACTGTGAATGCCAGTAAATTCAGCCCAGGGGACAACATCAGAGTCACTCTCTCTGGAAGTGAGCCTTTTGAGGGCTTTCTAATTCAGGCCAGAGATGCCACTAACCTTGATGGATTAGCTATCGGATCTTTCACACTGGTCAATCTGAAGATTTCTCAGCGATTGACATGCAACGGTATAGAGGGTTCTGCTGTTAGTCACACAAGTGATGTCAAAAAGAGAGAAATTGAGGTGATCTGGAAAGCTCCATCCAATTCTCCTCTTGCTGTTCAGTTTCTCGCCACAGTTCTTGCTCACTACAAAGTTTTCTGGCTCAAACTTCGTGGTCCTGTGATAACTCATGGTGATGCGACTCCTGCTCCACCTCAGTCCACCACTGTCATGTCTACACACTCTTCCAGCACCTCTATAATACCTCAGCCATTCAGCTCAGATGGATGTGGCAGGCAGAAGACTTGTCTCCTTGACCCTGTCGGCTGTAACCCTTCTGTAGACACAAACTGCTTTTACCTCGCTTATTCTACTTCGGGGCAGACGGTTTCATTTGAGCTCAGTGGACCTGCACAGGGATATGTCTCCTTCGCTCTGTCTAGTGATAAATGGATGGGTGATGATgatgtatatttgtgtgtatatgacGGTGGTCGAGTGAGTGTGGAAGCAGCTTACACTACAGGCAGGACATATCCAAAGGTGTCATCGCAGTCGGTGCTGATGGATGTAGGCTGGAGAGTTTCAGATGGGATCATTCAGTGCAAGTTCTCCCGATCCATCTACACCCCACAGGACCCGGAGCGCTTCAGTCTGAACAACAGCTACTACCTCTTCATAGCACACGGCAGTGCAGAATATGGTATGATCCACAGACACACGCGGCAGCCACTGATATCGTCCCATCATCAGGTCATTATCGGCCCTCCTGTGATACTGACAGGCTCTCGTTCTCCTCTTCTCATGAAATACCATGGAGCTTTAATGCTGATTGCCTGGATGCTAGCAGGAAGCACTGGGACTTTAATGGCGGGCTATTTTAAACCTGACTGGCCTGAACAAACACTGTTTGGACAAAAAATATGGTTTCAGGTCCACAGAATGTTGATGTCCCTTACAGTTTTACTCACATCTGTGGGCTTCATTGTCCCCTTTATCTACAGAGGAAAATGGAGCACAAGAGCGGGTGCTCATCCGTACCTGGGCTGCACTGTTATGATCCTGGCTTTCTGTCAGCCTTTAATGGCTGCATTCAGACCAGCTCCAGACTCCCCAAGGAGGTGGATATTCAACTGGCTGCACTGGGGTGTTGGAAATGCTGCTGAAATTATTGCTG

Function

symbol description
frrs1a Predicted to enable oxidoreductase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human FRRS1 (ferric chelate reductase 1).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-070705-45 Predicted to enable oxidoreductase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human FRRS1 (ferric chelate reductase 1).

Ensembl:

ensembl_id ENSDARG00000076183

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032127 False 1701 mRNA 0.47 15 20444477 20470125
TCONS_00032128 True 1495 mRNA 0.47 12 20448234 20470140

Neighbor

gene id symbol gene type direction distance location
XLOC_016296 plppr5a coding downstream 120576 20262479 ~ 20323901 (-)
XLOC_016295 NA coding downstream 296108 20124994 ~ 20148369 (-)
XLOC_016294 dpydb coding downstream 323573 19824190 ~ 20120904 (-)
XLOC_016293 BX088713.2 coding downstream 809386 19634994 ~ 19635091 (-)
XLOC_016292 BX088713.1 coding downstream 822833 19601696 ~ 19621644 (-)
XLOC_016300 si:ch211-267e7.3 coding upstream 85254 20555394 ~ 20599315 (-)
XLOC_016301 dusp12 coding upstream 188119 20658259 ~ 20715094 (-)
XLOC_016302 AL954134.1 coding upstream 229341 20699481 ~ 20704523 (-)
XLOC_016303 FO681336.1 coding upstream 287442 20757582 ~ 20757699 (-)
XLOC_016304 CABZ01020455.1 coding upstream 293149 20763289 ~ 20788698 (-)
XLOC_016291 NA non-coding downstream 849416 19592454 ~ 19595061 (-)
XLOC_016290 BX664750.7 non-coding downstream 864798 19579582 ~ 19579679 (-)
XLOC_016311 NA non-coding upstream 652048 21122188 ~ 21124115 (-)
XLOC_016313 NA non-coding upstream 725388 21195528 ~ 21208559 (-)
XLOC_016314 CU464125.1 non-coding upstream 842602 21312742 ~ 21320684 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_05803106_05809498 NA coding CI01000004 null 5802857 ~ 5809498 (-)