XLOC_016296 (plppr5a)


Basic Information

Item Value
gene id XLOC_016296
gene name plppr5a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 20262479 ~ 20323901 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032126
AGACTCCAGCGCACTTCACAGCGCTCTGTCAGCGACACAATGCGCTTCTATCCCTGCAGGATTTTATGACATGTCATGGTGGAATAAGAGGAAATCATGCCAAAACTACCATAGGAACCGGAGGCCTTTCGTTTATTTCCCGGGATCCGTTTGAGCCTCATCGACAATGCTTTACTTTCAGCTGGTGATCATGGCAGGGACTGTCATGCTGGCTTACTACTTTGAGTACACCGATACTTTCAACGTGCACGTCCAGGGATTTTTCTGTCATGATAATGCCTATACGAAGCCCTATCTGGGACCAGAGGAGTCCAGTGCGATCCCACCGGCTATCCTTTACGCGGTGGTCGCAGGGGTCCCGGCACTTGTGATTACAGTGACAGAGTCCGTGCTCTTCTTGCTGCAGTATGTGTCTGAGGATCTAGACAACCGAGAGAAGATCATTGTGATGGGCGACTGTTGTTACCTCAACCCTCTGGTCAGAAGGACGTTTCGCTTTCTTGGTGTGTATGCATTTGGCCTGTTTGCCACAGACATCTTTGTAAATGCCGGGCAGGTGGTGACAGGAAATCTTTCTCCATACTTCCTGACGGTGTGCAAACCCAACTACACAGCACTGGGGTGCCAACAGGTGGTGCGTTTCATCAACCAACAGGACGCTTGCACTGGCAACGAAGATGATATCTTACATGCTCGCAAATCCTTCCCATCCAAAGAGGCGGCCATCAGTGTTTATGCAGCTCTTTATGTTGCAATGTACATCACTTGCTCGGTGAAGGCCAAAGGGACACGGCTGGCCAAGCCGGTGCTCTCTCTGGGGCTCATGTGTCTGGCCTTCCTAACTGGGATTAATCGAGTGGTGGAGTATCGAAACCACTGGGCTGATGTCATCGCTGGCTTCATCATCGGAGGAGCCATTGCTGTCTTTATGGTGGTGTGTGTGGTGAAGAATTTCAAAGGGAAGCCCTTACTGAGTGAGATCCCACCAGAGGAGAGTGTATCCAGCGGTCCCATGATCACTCAACCCAGATTGGACCACACTATGGAGAAATACATAGCCTCCCAGAATCCGATCACCTATGCTGAGATCACATGACAGTGAAAAGCCAGCTTGCCAGAATGCTGTGGAAAATGTTGCTGCTCTCCGATGCGACTTCTTACTTTGAGCGCAACGTCGATATGTGCTATTTTTGACACTTTTATTTTCAAGTGTGTGTAAAACGTGTCAATACCTTGTTGTCCTTCTTgtaactttgattttttttatatggaaAATAGTTACAGTAGGATTGCATCCCCATTTTTATACAAGCATATTATTTTTAGGATTTTTGTGGTTGAAAATACAGGGTATGGAGTGACTCTGTGCAACATGACATCCAACCAAAATGTGTTTCATATAtcctaatgttttattttacagtaaaactgTGAGTCTATTTTTGAAATATCGTTATTGATCTCTTTCTTTTGAGGTGTTGTTTGATAGTAATGCTTTTTTGACACTTTCCTCTCACCAATACATATCacagtacatatacagtagaGTTGCATCAGATTCCATTCTCTGCATTTTAAAGCACGTTTAGGATTTGAGTATTGTGAAGGGAGATTTTATTCTAGAGAGCGTCTGATTGGTTAAAAGTAAGTGTGGTGCAGGATGAGTCATCAGTTTTTAGTGTTCAGTTTTTATGGACTATATTCTAATTAAAACAGTCCACATAGACTTTAAAAACTACAAAAGTGGTGTTAAAAGTGGGCTTAAGCTGAAATCATGATTGATTTTGCTGTCATTATGGCGGAGAGCTCCTTGAGCAGAACTGATGGATTGAATTGTGACTGGCAATTGATTACAGGACTCGAAAGATTAGATGCTCAAGCATTTGCCCAAAGAGGCTGCTAGGGTGTGTATGAGGTGTGCGtttgtctttctgtgtgtgtttatgtttgtgcttATTTGTGAGTCCACCCTTGATGTTGCCTTTTTGAGTATCGAGTCTCTAGTGGTTCGAAGAAGGACGcttctttctcttttttgtttttcttcttgttattttttatttatttttttggcaaacATTGAACTGGAATAATCCTTTTACCTGACAAAAATATGGAAGTATAGACCATAGCTTTTTCATAATGATTTATATCAAAGGATGCATTTGTGATTtcagtcaaatttttttttattatatccaaAAGCTGGTTAGCATCAAAGGTCTGCAGTGTTTGGTTGAATTTACATTCTGCAGATTGATATTATACACGATTCTGACTGAGTAAATGTTTGATCTCTTACTGCCCAGTGATGAGGTTTGATTTTCAAATTTATGCCTggaatacattaaaaataatgtctCCTAATGATGTAAATCATTTATCCTGATCATCTCACACTTGCAGTTGCACCCTGAATCCTTTCAAGCGGACTGTTTGTCTCTTCAGTTGAGGCTTTCATCAGGGCAAAGCTTGCGAATATAATTTCTTAGAGAGGTTTTGGCTTGATCTCTGAGCAGTTTGTTAGGTACTCGTTGTAAATCTGAAAATGAAAACAATTCAGAAAGAGCTACTGCAATAAATGCACACAGATTTAAATTCAGGGTTGTTTTCTAATGAAAGATGTGTGATTTTGTCTCCCCAACAGGGtcagaaaaaaatgtgtattggTACAGTAGCCTATGTATATTGGGTAAACCCAAAAGTCCtggttattttttattacattttgaatcCTTTAATTTCTACTATTAAGACCAATATTTGTTTTCTACATCTGACCATTTTCTATATTCAGATTGTTCTCCTGACATCACTGTTAGCTAATATTTAGtttgttgttttaatattaataatcaggTTGACCTATAAGTTGAGTTTATATGTGTATTTCTGATCATGTTCTGTTTATGAAAGTgtagcactttacaataaaggTGTATCTTAGTGCTTCATGATTAA

Function

symbol description
plppr5a Predicted to enable lipid phosphatase activity and phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human PLPPR5 (phospholipid phosphatase related 5).

GO:

id name namespace
GO:0046839 phospholipid dephosphorylation biological_process
GO:0006644 phospholipid metabolic process biological_process
GO:0007165 signal transduction biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008195 phosphatidate phosphatase activity molecular_function
GO:0016791 phosphatase activity molecular_function
GO:0042577 lipid phosphatase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070705-281 Predicted to enable lipid phosphatase activity and phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human PLPPR5 (phospholipid phosphatase related 5).

Ensembl:

ensembl_id ENSDARG00000057209

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032126 True 2961 mRNA 0.40 6 20262479 20323901

Neighbor

gene id symbol gene type direction distance location
XLOC_016295 NA coding downstream 114110 20124994 ~ 20148369 (-)
XLOC_016294 dpydb coding downstream 141575 19824190 ~ 20120904 (-)
XLOC_016293 BX088713.2 coding downstream 627388 19634994 ~ 19635091 (-)
XLOC_016292 BX088713.1 coding downstream 640835 19601696 ~ 19621644 (-)
XLOC_016291 NA coding downstream 667418 19592454 ~ 19595061 (-)
XLOC_016297 frrs1a coding upstream 120576 20444477 ~ 20470140 (-)
XLOC_016298 NA coding upstream 129713 20453614 ~ 20462923 (-)
XLOC_016299 NA coding upstream 134046 20457947 ~ 20459009 (-)
XLOC_016300 si:ch211-267e7.3 coding upstream 231493 20555394 ~ 20599315 (-)
XLOC_016301 dusp12 coding upstream 334358 20658259 ~ 20715094 (-)
XLOC_016290 BX664750.7 non-coding downstream 682800 19579582 ~ 19579679 (-)
XLOC_016302 AL954134.1 non-coding upstream 375580 20699481 ~ 20704523 (-)
XLOC_016303 FO681336.1 non-coding upstream 433681 20757582 ~ 20757699 (-)
XLOC_016311 NA non-coding upstream 798287 21122188 ~ 21124115 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_05709639_05728550 NA coding CI01000004 null 5708626 ~ 5728791 (-)
bowfin (Amia calva) AMCG00005110 plppr5,LOC107739033,LOC107657749,LOC107677304,LOC107712819,LOC106578506 coding CM030140.1 CM030140.1 15465083 ~ 15492249 (+)