XLOC_016301 (dusp12)


Basic Information

Item Value
gene id XLOC_016301
gene name dusp12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 20658259 ~ 20715094 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032131
CAACAACATCCTTTGCGGAACTAACAAGTACACATTGTTTCCTACGGACTTTTTATTTTCGTGGACACCTTTTTTGACAGCAGAGTAAGCACGTGAGTGTAAAAGCGTCAATGTTTACAGTAAAGTCATCATTAGAAAAGCTGCAGGCAGATTGGTGTTGAAGTTATGCATTTACATTTGTTGTTAAACTTTTATGAAAACTTAATGGTCTTGGAAATGCAATATCTGTTATCTCTTACTAAGAAGTTCTCATGAGTGTATTATATATACTTTGTTATGTCTAACTGGTCAGTGTAATGAACTGCACCATGTGTGTTTCGTTTCAGTTGCTTCAGTGAATGGATTGTATTTGTTTCATTGCGTTGATATTGAATACGTTTTGTGTTTGCTTAGTTAACCATGATACCCGTGGCGTCTGGACTCTACATCGGGTCAGTGTCTGATCTGAAGGATGCTGAGAGTCTGTCAGCTGCAGGTATAACACACATTCTGACTGTAGACTCAGAGGAAGCTTCTGTCACTGGATTCAACACCAAATTCATCCGAGCTCTGGATGATGAGTCCACAGACCTGCTGAGCAGACTAGATGACTGTACCAGCTTTATTTCTGAAGCCCTTAGCACACAAGCTGACTCCAAATCAGCAGCAGTTCTTGTGCATTGCCATGTGGGGCAAAGCAGAAGTGCTGCAGTGGTGACTGCTTACCTGATGAAAACACAGCACCTGACCTTACAGGAAGCATATTCTAAACTGCAAAACATAAAACCAGATGTCAAAATGAATGAAGAGTTTCTGGATCAGCTGGCACTTTATGAATTGATGGACTGTAAAGTGGACACCACAAGTCCTGTTTACAAACAGTTTAGGCTGAAAAAGATTACAGAGAAATATCCAGAGCTCCAGAATGTGCCAAAAGATGTATTTGCTGTTGACCCTGCACAAACCCAGAATGCAGAAGCTGTATACAGATGTAGAAAGTGCAgACGCACACTTTTCCGACACTCCAGCATTCTCAGTCACTGTGTGGGAAGTGGAGCGTCTGCCTTCTCTCATAAGAAGACACGGATTGTGAGCTCTTCAGCTGAAGATGAGACACAGTGCACTTCCTATTTTATAGAGCCGGTGCAGTGGATGGAGCAGGCTTTACTAGGGGTCATGGATGGACAGCTTCTGTGTCCCAAGTGCAGCTCAAAGCTGGGCTCCTTTAACTGGTATGGTGAACAGTGTTCGTGTGGCCGCTGGGTCACACCGGCCTTCCAGATGCACAAGAACAGAGTGGACGAAATCAAACACATCAGTATATCTGCACTCAAATGACCTCCAATAAACTTCTGTATCATATGcacaaaaattgtttttatttttagtgttttgagTTAAATAATACACAACTTTTTGTATGGCATAAATTATaagctatatacatatataactatATGATAAGGAACATTTGATTTGGTTACTAGTTGTTGTTAGTaaaatgtagacatttgacatttCCCCCAGTTTTTGCTCAAGATGCGAATTTTAACCAGATCCCACATGGCAAgacaaaaactgatttttttttcgtCATGTTATTGTTTTGTGGAATgagaaattcactgaaatatcacagtaacagagttgacaaataaTGAATCTACTATTAGTGTATCCTCAAGTTTGTAAAAATTGATTAAAGTATAAATGACCTGCCTCAGTGCCTTCACTTGGAGTAAGTCACTTGGTTTTTCTACTAGTGCTTTACAGATTGTTCTGCCTTTTATcgctgaaattaaaataatacagaGAATAGATGTTTCATATGCAACAGTTTAATAAACATAGTTATTGCACATACAAGATGAAAATTAGGCTTAATCATTTCCTGATAATTGAAGCTGAATGTGTAATTCAGGAggcagaaaaagtaaaaaaatagataaagtagtctttaatatttttaacataaaaaatagtatttaaataattttaaatattataaataaaagacaaaatggCCCTAAGTTTACATACAAGTGTAAATTGTTAGAAATAACATGAAATAAGTTGTTATTATTCAAAActaattaacttttattttatttagttttatttagaaaaataatagaagattatatataatataattatataaataattatataaatataatcattttaatttgtaaattattcctgtgatggcaaagctgTTTGTTTACTCCAGTCTGTCACATGATCCTCCAGAAGTCATTCataatatgctgattttgtgcagcaaaaataaaataaaataaaaacctatgTTATCACTTATTTTGAAAGTTATTAATTTTCTGCTAAATTTGAAACATTATAATTCTTTGATGATTTTAAcgtttaaacataaaaataaatattaaatatatatagacagacaaaacaaaaaaaaaacctcttaatGTCCCAAACTTTTGTAATGGGTTTATATATTCTGGTTTTATTTACCTTGTTTTGTCTCTTCCATAAATGAGTATGGTTTATTTAAATTAACCTCtgcatttttcaaataaatattaccAGTCTCATCAAAGAGCTTACATGTACATTTCTTTCCATCCAATAGGAGGCGACAAATAACTATCACTGTCAATTGATTAGACTAAAATGTTAGTCATAGTCAAAATGGTGAAGAATAAGGATAAAGTAGCATCCGTTCATGTTTACACTACCATTATAGATGACAAGTAACAAAAAGTGAGACCATatggaaaagaaaaacagtacTAGTTGTCGATAACTATTCAAAATGGGTAGAATTCTTAAGATACTACATTTACTTATAGTGGTGCCACACAACATTTGTTCATAAGTTGGACATGATGTACACTGGTAATGATGCAGTTTCCTCTTGGCCTCCAGCTCAGAGATGTTTCTATGGTCTATTTATTGCACGGGCCTGAGAGAGACGCTGTGTGGTTATGGCATTGAGTTGTGAGATCCTGTTGTGTTTATGAGGGTCATCTTCTTCATGTAATAGCCTGAACTCTCTCTGTGAAGTGTGAAGAAATGAAGAGCTGCCTGCTGTTCATGTACACCGAAGAGAAACACTCATTTAAGAGTTTGGGCTAGATTTAGGGTGATATGAAAGTCCTTAAAATGAAGTTTTATAGTACAAtaatggcaagccattttaacatGGAATCTTTAAAACATACTGGTGTCTGTTTTCATGCAACTGGGGTCTCATTTCATAAGTTATATAATCAAAAGTTGAGAAACGTCTGATctataaaaaacaaacttgacaggagAATGCGCTCAGCTGTAAGTAAACATTTCACTTTTAGGAAGGTATTTGATAAATCGGAACCCTGTTTTTTGTAAGAGGTACTTcttgattaaatattaattcatattattcccatacatacagttgaagtcagaattattagccaccctttgattttttttttatatatttcctaacttttgtttaacagagcaaggaacttttcacagtatgtctgataatatgttttctattagagaaagtcttttttgttttattctggctagaaTCAAAGCCCAAACCATTTGAAaatcaattttaaggtcaaaattatcagtccctttaagctgtatatatttttcgatagtctacagaacaaaccatcgttatacaataacttgcctaattaccctaacctgcctagttaaccttattaacctagatagggctttaaatgtcactttaagctgtatagaagtgtcttgaaaaatcaagtaaaatattatttactgtcatcatggcaaagataaaataaaccagttattagaaatgagttattaaaaccattatatttataaatgtgtagaaaaaaattgttgctccataaaacaaaaattggggaagaaataaacataaggttaataatttaggggggctaattctgacttcaactgtatattttagagGTATAAGTAATACGTTcggaggttcattccactttggtgaccacagataaataaagggactaacctgaaaagaaaatgaatgaaatggagTAAGTTATAACAACTAGTATTTTGTAAAAAGTAAAACACATTTGGAAGGCATAGCTACATTGAAAACAAAAATCATTATTACAAATGTCTTTTATTATTTGCAACAATGTAGCAGTGATTCTTATAAATGGCTCTCACAGCTAGTTTGTACAGTATCTCTTTcgaatgactttaaaaaaaagctaGCAACAAAACTAAACAACTGTTCCATACACATAAAATAAAGGAAACTCTGAGAAATAGAGGCACATTTTCTTTCTCTTCATTCACAAATAATCAGTGGC
>TCONS_00032132
ATTTTCGTGGACACCTTTTTTGACAGCAGATTAACCATGATACCCGTGGCGTCTGGACTCTACATCGGGTCAGTGTCTGATCTGAAGGATGCTGAGAGTCTGTCAGCTGCAGGTATAACACACATTCTGACTGTAGACTCAGAGGAAGCTTCTGTCACTGGATTCAACACCAAATTCATCCGAGCTCTGGATGATGAGTCCACAGACCTGCTGAGCAGACTAGATGACTGTACCAGCTTTATTTCTGAAGCCCTTAGCACACAAGCTGACTCCAAATCAGCAGCAGTTCTTGTGCATTGCCATGTGGGGCAAAGCAGAAGTGCTGCAGTGGTGACTGCTTACCTGATGAAAACACAGCACCTGACCTTACAGGAAGCATATTCTAAACTGCAAAACATAAAACCAGATGTCAAAATGAATGAAGAGTTTCTGGATCAGCTGGCACTTTATGAATTGATGGACTGTAAAGTGGACACCACAAGTCCTGTTTACAAACAGTTTAGGCTGAAAAAGATTACAGAGAAATATCCAGAGCTCCAGAATGTGCCAAAAGATGTATTTGCTGTTGACCCTGCACAAACCCAGAATGCAGAAGCTGTATACAGATGTAGAAAGTGCAgACGCACACTTTTCCGACACTCCAGCATTCTCAGTCACTGTGTGGGAAGTGGAGCGTCTGCCTTCTCTCATAAGAAGACACGGATTGTGAGCTCTTCAGCTGAAGATGAGACACAGTGCACTTCCTATTTTATAGAGCCGGTGCAGTGGATGGAGCAGGCTTTACTAGGGGTCATGGATGGACAGCTTCTGTGTCCCAAGTGCAGCTCAAAGCTGGGCTCCTTTAACTGGTATGGTGAACAGTGTTCGTGTGGCCGCTGGGTCACACCGGCCTTCCAGATGCACAAGAACAGAGTGGACGAAATCAAACACATCAGTATATCTGCACTCAAATGACCTCCAATAAACTTCTGTATCATATGcacaaaaattgtttttatttttagtgttttgagTTAAATAATACACAACTTTTTGTATGGCATAAATTATaagctatatacatatataactatATGATAAGGAACATTTGATTTGGTTACTAGTTGTTGTTAGTaaaatgtagacatttgacatttCCCCCAGTTTTTGCTCAAGATGCGAATTTTAACCAGATCCCACATGGCAAgacaaaaactgatttttttttcgtCATGTTATTGTTTTGTGGAATgagaaattcactgaaatatcacagtaacagagttgacaaataaTGAATCTACTATTAGTGTATCCTCAAGTTTGTAAAAATTGATTAAAGTATAAATGACCTGCCTCAGTGCCTTCA
>TCONS_00032133
TTTCCTACGGACTTTTTATTTTCGTGGACACCTTTTTTGACAGCAGAGTAAGCACTTAACCATGATACCCGTGGCGTCTGGACTCTACATCGGGTCAGTGTCTGATCTGAAGGATGCTGAGAGTCTGTCAGCTGCAGGTATAACACACATTCTGACTGTAGACTCAGAGGAAGCTTCTGTCACTGGATTCAACACCAAATTCATCCGAGCTCTGGATGATGAGTCCACAGACCTGCTGAGCAGACTAGATGACTGTACCAGCTTTATTTCTGAAGCCCTTAGCACACAAGCTGACTCCAAATCAGCAGCAGTTCTTGTGCATTGCCATGTGGGGCAAAGCAGAAGTGCTGCAGTGGTGACTGCTTACCTGATGAAAACACAGCACCTGACCTTACAGGAAGCATATTCTAAACTGCAAAACATAAAACCAGATGTCAAAATGAATGAAGAGTTTCTGGATCAGCTGGCACTTTATGAATTGATGGACTGTAAAGTGGACACCACAAGTCCTGTTTACAAACAGTTTAGGCTGAAAAAGATTACAGAGAAATATCCAGAGCTCCAGAATGTGCCAAAAGATGTATTTGCTGTTGACCCTGCACAAACCCAGAATGCAGAAGCTGTATACAGATGTAGAAAGTGCAgACGCACACTTTTCCGACACTCCAGCATTCTCAGTCACTGTGTGGGAAGTGGAGCGTCTGCCTTCTCTCATAAGAAGACACGGATTGTGAGCTCTTCAGCTGAAGATGAGACACAGTGCACTTCCTATTTTATAGAGCCGGTGCAGTGGATGGAGCAGGCTTTACTAGGGGTCATGGATGGACAGCTTCTGTGTCCCAAGTGCAGCTCAAAGCTGGGCTCCTTTAACTGGTATGGTGAACAGTGTTCGTGTGGCCGCTGGGTCACACCGGCCTTCCAGATGCACAAGAAC
>TCONS_00032134
AGAGTAAGCACGTGAGTGTAAAAGCGTCAATGTTTACAGTAAAGTCATCATTAGAAAAGCTGCAGGCAGATTGTTAACCATGATACCCGTGGCGTCTGGACTCTACATCGGGTCAGTGTCTGATCTGAAGGATGCTGAGAGTCTGTCAGCTGCAGACCTGCTGAGCAGACTAGATGACTGTACCAGCTTTATTTCTGAAGCCCTTAGCACACAAGCTGACTCCAAATCAGCAGCAGTTCTTGTGCATTGCCATGTGGGGCAAAGCAGAAGTGCTGCAGTGGTGACTGCTTACCTGATGAAAACACAGCACCTGACCTTACAGGAAGCATATTCTAAACTGCAAAACATAAAACCAGATGTCAAAATGAATGAAGAGTTTCTGGATCAGCTGGCACTTTATGAATTGATGGACTGTAAAGTGGACACCACAAGTCCTGTTTACAAACAGTTTAGGCTGAAAAAGATTACAGAGAAATATCCAGAGCTCCAGAATGTGCCAAAAGATGTATTTGCTGTTGACCCTGCACAAACCCAGAATGCAGAAGCTGTATACAGATGTAGAAAGTGCAgACGCACACTTTTCCGACACTCCAGCATTCTCAGTCACTGTGTGGGAAGTGGAGCGTCTGCCTTCTCTCATAAGAAGACACGGATTGTGAGCTCTTCAGCTGAAGATGAGACACAGTGCACTTCCTATTTTATAGAGCCGGTGCAGTGGATGGAGCAGGCTTTACTAGGGGTCATGGATGGACAGCTTCTGTGTCCCAAGTGCAGCTCAAAGCTGGGCTC
>TCONS_00032135
CACGCATCTCAATCCGCCAGCTGAGAAGAACTAATGTAGCGATGCTTCAGCTCTGCTAGACTCATTTGAATGAGAAACAATCAGCAGCGCTGCAGGAGCTTTCAGACTGCCTGCCAAGACCAGCCATGTGGGGCAAAGCAGAAGTGCTGCAGTGGTGACTGCTTACCTGATGAAAACACAGCACCTGACCTTACAGGAAGCATATTCTAAACTGCAAAACATAAAACCAGATGTCAAAATGAATGAAGAGTTTCTGGATCAGCTGGCACTTTATGAATTGATGGACTGTAAAGTGGACACCACAAGTCCTGTTTACAAACAGTTTAGGCTGAAAAAGATTACAGAGAAATATCCAGAGCTCCAGAATGTGCCAAAAGATGTATTTGCTGTTGACCCTGCACAAACCCAGAATGCAGAAGCTGTATACAGATGTAGAAAGTGCAgACGCACACTTTTCCGACACTCCAGCATTCTCAGTCACTGTGTGGGAAGTGGAGCGTCTGCCTTCTCTCATAAGAAGACACGGATT

Function

symbol description
dusp12 Predicted to enable protein tyrosine/serine/threonine phosphatase activity. Predicted to be involved in protein dephosphorylation. Predicted to act upstream of or within dephosphorylation. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human DUSP12 (dual specificity phosphatase 12).

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0016311 dephosphorylation biological_process
GO:0005634 nucleus cellular_component
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0016791 phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
ko01009 Protein phosphatases and associated proteins
ko03009 Ribosome biogenesis

ZFIN:

id description
ZDB-GENE-050626-91 Predicted to enable protein tyrosine/serine/threonine phosphatase activity. Predicted to be involved in protein dephosphorylation. Predicted to act upstream of or within dephosphorylation. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human DUSP12 (dual specificity phosphatase 12).

Ensembl:

ensembl_id ENSDARG00000076330

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032131 False 4316 mRNA 0.34 6 20658259 20667001
TCONS_00032132 False 1348 mRNA 0.42 7 20660864 20666947
TCONS_00032133 False 934 mRNA 0.47 7 20661303 20666964
TCONS_00032134 False 789 mRNA 0.46 8 20661373 20666920
TCONS_00032135 True 529 mRNA 0.45 5 20662359 20715094

Neighbor

gene id symbol gene type direction distance location
XLOC_016300 si:ch211-267e7.3 coding downstream 58944 20555394 ~ 20599315 (-)
XLOC_016297 frrs1a coding downstream 188119 20444477 ~ 20470140 (-)
XLOC_016298 NA coding downstream 195336 20453614 ~ 20462923 (-)
XLOC_016299 NA coding downstream 199250 20457947 ~ 20459009 (-)
XLOC_016296 plppr5a coding downstream 334358 20262479 ~ 20323901 (-)
XLOC_016303 FO681336.1 coding upstream 42488 20757582 ~ 20757699 (-)
XLOC_016304 CABZ01020455.1 coding upstream 48195 20763289 ~ 20788698 (-)
XLOC_016305 tpra coding upstream 96583 20811677 ~ 20866758 (-)
XLOC_016306 pdca coding upstream 167860 20882954 ~ 20890429 (-)
XLOC_016307 ptgs2a coding upstream 201403 20916497 ~ 20923864 (-)
XLOC_016295 NA non-coding downstream 509890 20124994 ~ 20148369 (-)
XLOC_016293 BX088713.2 non-coding downstream 1023168 19634994 ~ 19635091 (-)
XLOC_016292 BX088713.1 non-coding downstream 1036615 19601696 ~ 19621644 (-)
XLOC_016311 NA non-coding upstream 407094 21122188 ~ 21124115 (-)
XLOC_016313 NA non-coding upstream 480434 21195528 ~ 21208559 (-)
XLOC_016314 CU464125.1 non-coding upstream 597648 21312742 ~ 21320684 (-)
XLOC_016316 NA non-coding upstream 666231 21381325 ~ 21383394 (-)

Expression


Co-expression Network