XLOC_017073 (C20H6orf58)


Basic Information

Item Value
gene id XLOC_017073
gene name C20H6orf58
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 1412193 ~ 1421005 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034088
TTGTAGATATTTGACGTGGAAACGAGACTAAAGCATGTTTTTGTGCAGTGGGTGTGTTTTTCTCCACCCACACTGGTTTGGTTTTGTCTCCATGTGGGATCAAAGTCCATGTGCTGCCCGTTGATTAAAGCTCCTCTCTGCTGGACTCAGTGTTTCAGCAGTCCTGCTAGATGTCTGAGATGGGTTTCCTGCGATCAGTGGCCGCTGTGCTCTTGTTGGCTGTGTTTAGCCACGCAGCAGTAGTGACTGAGAATGGACTGCCGATTCAATGGGGAAAAGCTCCCAGTGATCTCTCCCATCTGCCCATATCGGACACTGGGGTCCAGGTAAACCCGTGGGACTACTCCCAGAGGATGACCATGTACAAAATGCTGATCAACGCTACTAATGCCTACATGAGCTCCATGGGCCCCGGGGAGCAGGAGAATCCGCTCTGGAGTCTTCCTCTGCAGCTCGGCTGGAAACTCAAATCAGGCCGGCTGGCGGACCCGACCCTGGACAGCAGCAGCACATGTGGATCTGAAGCTTCAGATCCGGTCTGCATCTCTCCTCTGAGCTGGTTTGCATGTGTAAACTACTACCTGTCTGTGCTGCCATTCCTGGCGGCAGTGGAGACTGGTGTGGTTAGCAGCGGAGGGCATCAGGTGCTTATTCAGGTCCCAGCAGAAGTGGCTCAGGATTACTGCTCCAGCTACAGCGACTGCTCCACCAAACACCCCAACGCCATGGCCAAATGGCACCTCTTTTTTCAGTCTCTGCGGCAGGTCAGCCAGTCCGAGGACAGCGATTTTAACAAGAAGGACAGCATTCTGGGCCTGATGTGGGCTGCCGAGGAGGAGTCTCTACAAACCGCCTCTGGGGCTTGCACTGAAAGGCAAAAGCTGTACTCATCTCCTGAGGTGAGCTTTCAGCAGAGCTGGCTGAACTCGGCAGCGTTTGTATCGGCGGCTCATTTCCATGCAAACATTGAGCGCTCTGAGAAGTTTATGGCTCCTCTGCCCAGCCGAGTCCTGCAGGAGGCCGACAGTCCACCCAACATCGCAGATCTGAGCACTGAAGAGAACCACACACTCTACATCTTCGGCTGGATGAACAGCGTCAACCAGCTGCTGGGCGGCTCTCTGGTGAATTTGTGGCGTAAGGCCATGTGTTCGGCTCAGGCTCGAGAAAAAGGTCAGGCTCTTCTTCACGACCTCATTCTGGACCCAAAGTTCCCCGGGTCCAGCCTTTGGTCCATTCTAAGCGAGATGTCCACCAGCTGCTGACACCGTGGTAAAGAGCAGAACACACACCGATCATCATGCTCACTGATATCTGACCGTCATCACTGCTGTCAACATGCacgacaaaataaaacaacatgcaaaCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000090722

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034088 True 1369 mRNA 0.54 6 1412193 1421005

Neighbor

gene id symbol gene type direction distance location
XLOC_017072 C20H6orf58 coding upstream 5885 1398564 ~ 1406308 (+)
XLOC_017071 mmachc coding upstream 19173 1385674 ~ 1393020 (+)
XLOC_017070 NA coding upstream 56510 1354663 ~ 1355683 (+)
XLOC_017069 tab2 coding upstream 61897 1329509 ~ 1350296 (+)
XLOC_017068 nup43 coding upstream 84334 1316495 ~ 1327859 (+)
XLOC_017074 NA coding downstream 242754 1663759 ~ 1725048 (+)
XLOC_017075 CABZ01065423.1 coding downstream 413257 1834262 ~ 1891596 (+)
XLOC_017076 lama2 coding downstream 482476 1903481 ~ 1979652 (+)
XLOC_017077 CABZ01103860.1 coding downstream 539087 1960092 ~ 1964823 (+)
XLOC_017078 CABZ01092781.1 coding downstream 575197 1996202 ~ 2035120 (+)
XLOC_017065 NA non-coding upstream 208319 1200292 ~ 1203874 (+)
XLOC_017061 NA non-coding upstream 511813 896905 ~ 900380 (+)
XLOC_017056 NA non-coding upstream 729901 681847 ~ 682292 (+)
XLOC_017082 NA non-coding downstream 792684 2213689 ~ 2214421 (+)
XLOC_017084 BX681416.1 non-coding downstream 840928 2261933 ~ 2266612 (+)
XLOC_017085 NA non-coding downstream 860619 2281624 ~ 2284813 (+)
XLOC_017087 NA non-coding downstream 1059905 2480910 ~ 2481815 (+)

Expression


Co-expression Network