RNA id: TCONS_00034088


Basic Information

Item Value
RNA id TCONS_00034088
length 1369
RNA type mRNA
GC content 0.54
exon number 6
gene id XLOC_017073
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 1412193 ~ 1421005 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTGTAGATATTTGACGTGGAAACGAGACTAAAGCATGTTTTTGTGCAGTGGGTGTGTTTTTCTCCACCCACACTGGTTTGGTTTTGTCTCCATGTGGGATCAAAGTCCATGTGCTGCCCGTTGATTAAAGCTCCTCTCTGCTGGACTCAGTGTTTCAGCAGTCCTGCTAGATGTCTGAGATGGGTTTCCTGCGATCAGTGGCCGCTGTGCTCTTGTTGGCTGTGTTTAGCCACGCAGCAGTAGTGACTGAGAATGGACTGCCGATTCAATGGGGAAAAGCTCCCAGTGATCTCTCCCATCTGCCCATATCGGACACTGGGGTCCAGGTAAACCCGTGGGACTACTCCCAGAGGATGACCATGTACAAAATGCTGATCAACGCTACTAATGCCTACATGAGCTCCATGGGCCCCGGGGAGCAGGAGAATCCGCTCTGGAGTCTTCCTCTGCAGCTCGGCTGGAAACTCAAATCAGGCCGGCTGGCGGACCCGACCCTGGACAGCAGCAGCACATGTGGATCTGAAGCTTCAGATCCGGTCTGCATCTCTCCTCTGAGCTGGTTTGCATGTGTAAACTACTACCTGTCTGTGCTGCCATTCCTGGCGGCAGTGGAGACTGGTGTGGTTAGCAGCGGAGGGCATCAGGTGCTTATTCAGGTCCCAGCAGAAGTGGCTCAGGATTACTGCTCCAGCTACAGCGACTGCTCCACCAAACACCCCAACGCCATGGCCAAATGGCACCTCTTTTTTCAGTCTCTGCGGCAGGTCAGCCAGTCCGAGGACAGCGATTTTAACAAGAAGGACAGCATTCTGGGCCTGATGTGGGCTGCCGAGGAGGAGTCTCTACAAACCGCCTCTGGGGCTTGCACTGAAAGGCAAAAGCTGTACTCATCTCCTGAGGTGAGCTTTCAGCAGAGCTGGCTGAACTCGGCAGCGTTTGTATCGGCGGCTCATTTCCATGCAAACATTGAGCGCTCTGAGAAGTTTATGGCTCCTCTGCCCAGCCGAGTCCTGCAGGAGGCCGACAGTCCACCCAACATCGCAGATCTGAGCACTGAAGAGAACCACACACTCTACATCTTCGGCTGGATGAACAGCGTCAACCAGCTGCTGGGCGGCTCTCTGGTGAATTTGTGGCGTAAGGCCATGTGTTCGGCTCAGGCTCGAGAAAAAGGTCAGGCTCTTCTTCACGACCTCATTCTGGACCCAAAGTTCCCCGGGTCCAGCCTTTGGTCCATTCTAAGCGAGATGTCCACCAGCTGCTGACACCGTGGTAAAGAGCAGAACACACACCGATCATCATGCTCACTGATATCTGACCGTCATCACTGCTGTCAACATGCacgacaaaataaaacaacatgcaaaCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000064419

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036538 lncRNA upstream 56510 1354663 ~ 1355683 (+) True XLOC_017070
TCONS_00036537 lncRNA upstream 208319 1200292 ~ 1203874 (+) False XLOC_017065
TCONS_00036536 lncRNA upstream 208391 1200292 ~ 1203802 (+) False XLOC_017065
TCONS_00036535 lncRNA upstream 208590 1200292 ~ 1203603 (+) False XLOC_017065
TCONS_00036360 lncRNA downstream 242754 1663759 ~ 1725048 (+) True XLOC_017074
TCONS_00036361 lncRNA downstream 740077 2161082 ~ 2162367 (+) True XLOC_017081
TCONS_00036362 lncRNA downstream 792684 2213689 ~ 2214421 (+) True XLOC_017082
TCONS_00034099 lncRNA downstream 840928 2261933 ~ 2266612 (+) True XLOC_017084
TCONS_00036539 lncRNA downstream 860619 2281624 ~ 2284813 (+) False XLOC_017085
TCONS_00034087 mRNA upstream 5885 1398564 ~ 1406308 (+) True XLOC_017072
TCONS_00034085 mRNA upstream 19173 1385674 ~ 1393020 (+) False XLOC_017071
TCONS_00034082 mRNA upstream 61897 1329509 ~ 1350296 (+) False XLOC_017069
TCONS_00034084 mRNA upstream 62031 1349043 ~ 1350162 (+) True XLOC_017069
TCONS_00034083 mRNA upstream 73208 1329628 ~ 1338985 (+) False XLOC_017069
TCONS_00034089 mRNA downstream 413257 1834262 ~ 1891596 (+) True XLOC_017075
TCONS_00034090 mRNA downstream 482476 1903481 ~ 1979652 (+) True XLOC_017076
TCONS_00034091 mRNA downstream 539087 1960092 ~ 1964823 (+) True XLOC_017077
TCONS_00034092 mRNA downstream 575197 1996202 ~ 2035120 (+) True XLOC_017078
TCONS_00034093 mRNA downstream 618513 2039518 ~ 2054547 (+) True XLOC_017079
TCONS_00034086 other upstream 19538 1385749 ~ 1392655 (+) True XLOC_017071
TCONS_00034041 other upstream 1094088 262995 ~ 318105 (+) False XLOC_017045
TCONS_00034116 other downstream 1487546 2908551 ~ 2908665 (+) True XLOC_017093
TCONS_00034146 other downstream 3653919 5074924 ~ 5075054 (+) True XLOC_017116
TCONS_00034147 other downstream 3685563 5106568 ~ 5112043 (+) False XLOC_017117
TCONS_00034151 other downstream 4002957 5423962 ~ 5424096 (+) True XLOC_017119
TCONS_00034155 other downstream 4253025 5674030 ~ 5697001 (+) True XLOC_017120

Expression Profile

//