XLOC_017532 (znf512)


Basic Information

Item Value
gene id XLOC_017532
gene name znf512
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 38524827 ~ 38538994 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034839
TACCTTCACTGATTCTGTGATTATTGCCATAATCGTCCTTCTGAGCTGAAAGTTCTTGATACCTGGAAAAAGCTCATTCAGATCTTCTCTGGTCAAAGATCATTGATCAGACCCAGAGAAATGTCTGGCAAATGTGAACCCAGCAAGAGGAAAATGGCTAGACCAAAACTAAACCCCGAAACAACAGATGTGGTAAAGGATTTAAGAAGAGAGGCTAAAGAAAGTGGAACGAGACCCTCCAAAAATATGGGAACAAGCTctcaaaaaacaaagaaaacatacCCCCGAAAAAGGTATCATGATCTCCAGCCTGTGATTATGAGACCTACAGAGGATTCAGACCATGGGTTGTCCTGCAGTTCTGTTACCACTTCCAGCCTGGCCAATGGCTTGGAGAGccaaaatatgcaaatattccACACAGAGGGAATAATAGGAAAAAGTGATGGATCCAGTTCAGACACATTTACTGAAAGAGATTTTAGAATGAAAAAGAAGCAGAAGATGGAGGAAACCGACTGTTCCTCCTTGAAAAAGTACATCGAGCAAGTAAAGCAAACAGTACCTGTTATAGTTCCTGTTGCTCAGTTCTCGCAGAAGACTCAAAGGACTGAGGAGCAGAAATCAGCTCAGCACAACAAGAAAGAG
>TCONS_00034840
GAAGTGATCTCTCCGAACGGACGGTAATGTTGAAGCTACTCTTGTTTTGTGAGCGGATCATTGATCAGACCCAGAGAAATGTCTGGCAAATGTGAACCCAGCAAGAGGAAAATGGCTAGACCAAAACTAAACCCCGAAACAACAGAGTCAGCTTCCTCTTCAACAGATGTGGTAAAGGATTTAAGAAGAGAGGCTAAAGAAAGTGGAACGAGACCCTCCAAAAATATGGGAACAAGCTctcaaaaaacaaagaaaacatacCCCCGAAAAAGGTATCATGATCTCCAGCCTGTGATTATGAGACCTACAGAGGATTCAGACCATGGGTTGTCCTGCAGTTCTGTTACCACTTCCAGCCTGGCCAATGGCTTGGAGAGccaaaatatgcaaatattccACACAGAGGGAATAATAGGAAAAAGTGATGGATCCAGTTCAGACACATTTACTGAAAGAGATTTTAGAATGAAAAAGAAGCAGAAGATGGAGGAAACCGACTGTTCCTCCTTGAAAAAGTACATCGAGCAAGTAAAGCAAACAGTACCTGTTATAGTTCCTGTTGCTCAGTTCTCGCAGAAGACTCAAAGGACTGAGGAGCAGAAATCAGCTCAGCACAACAAGAAAGAGACCCATGTTTATCCACCAGGAAGTCAGGAGGAGAAATGGCAGCTGCAGATTTTGGCAAAGGGTAGAGTAACCTGCCCAAAATGCAAAAGTGTTGGAAGAAAGACAGTGGATGGGTTAAAGAAACACCTGGAAACATGCAAACTGAACCCTTTTACATGTCCACATTGTGAGAAACAACTGAAAACTTCAACTGGAATGAAGTACCACCTCATGGCTGACCACAACAGCTTGcccATTCCAGACACTGGCAATGAACTAGTTGACCAGGAAGTGAAGGAAAAACTACGCAAAGTATTAAAAAGAATGGGCAAATTAAAGTGCTCCAGAGAGGGCTGCACTGGAAGTTTCACTAGTATAATGGGTTATGTATACCATATGAAGAAATGTGGCAAAGAGTCGTCCGAGCTGGAGAAACTTTTATTGAATTGTAAACACTGTGGAAAAGCATATCGTTCCAGAGCGGGCCTGGAGTATCATCTCAAAAATGAACACAGTCCAGTAGCTGAGGAAAGTGAGGAGGTAAAACCCCAGAAAGAGCCGGTGCCAGAACGGACACAGAGCGGACGGGCCAAACGTTTGTCGGCGCAGGTCGCCGGGTTTTACCTGAGAGAAATCGCCAGCGAGGAGCTGCTAAAGGAATGGCCCAAAAGAAAAGTCCAACGAGACCTGGTGCCAGATGACAGGAAGCTGAAGTATTCTCGTCCAGGGTTGCCTTCCTTCAGCCAGGACACTCTGCGGAAGTGGAAGAATGAAGTCAAACTGCATAAGAAAGTGCAGTGTCCAAACAAGGGTTGTGGATGCTTCTATACCAGTGTATCAGGCCTGAAGGCTCATCTTGGACTGTGTACCTTGGGTGAATTTGAGACTGGGAAgtataaatgtttaatatgtaAGAAAGAATTCAACTCTGAAAGTGGAGTCAAGTACCACATCAATTCCATTCATGCTCAGGACTGGTTTGTTGTTCGGTCCAAGTCTAAGAGCTTAAAGTTTGAAAAACTGGACAAGACTCAAGCAAAGGAAGATTCAGACCTTCCCTCGCCGGACTCAGAAACTCTCAGTTTCCCCCAGGGCTCCAGCAGCACTTGGCAGGACAGACAGACGTCAGCGGTGCCCATCTCAAGTGGCACAGCGACTCAAGaactgaaaatgaagaggaaagaGAGACGAAACCAACAGAAACGGAAAGCAAGCGGACAGGAGAAAGACTGCTATGAATTCAGTGGCAATGAGAGTCAGAGCAGCAGCggcagcagcagctccagctccagCAGTGAGTCTGAACCCGAGACCCACAAACAGGATGAATGGACCCTCAGCAGACCCCTCTCCAGCCAGAGACCCGAAAGTGACCCGTAAAACATTCCTGTTCCGTCATATGTGGAGTTCTCCAAAGATTAAAGAGGTACATTACTGTTCAGAAGTTTTGAgtaaaagggatagttaacccaaaaattaaaatttactcagtatttactcaccctcaagtgcttccctacaaccattgacttcaatagtaagaaaaacaatactatggaagtcaatggtcacagttttcagcatttttctaaatatctgcttttgtaagaatctcataaaggttaattaatgatgacaggattttcatttttgtgtgaaccatccctttaagagaAAAAAGACGTCTCTTTTGCTCACCAAagtttgaatacatttattaataatcaaagcataaatagtaatattgttttacaattttgtaagacatttaatttattcttttaatggtaaatctgattttttttacagtattttctgtgTCATATGATCAtttaatacactcaaaaaatgattgctgtttgttcaaactgcatatttaaaatgagctttggaggggaca

Function

symbol description
znf512 Predicted to enable metal ion binding activity. Orthologous to human ZNF512 (zinc finger protein 512).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-346 Predicted to enable metal ion binding activity. Orthologous to human ZNF512 (zinc finger protein 512).

Ensembl:

ensembl_id ENSDARG00000041910

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034839 False 648 mRNA 0.42 7 38524827 38529780
TCONS_00034840 True 2506 mRNA 0.43 16 38525567 38538994

Neighbor

gene id symbol gene type direction distance location
XLOC_017531 coq8aa coding upstream 5701 38458084 ~ 38519126 (+)
XLOC_017530 NA coding upstream 77580 38373672 ~ 38447247 (+)
XLOC_017529 stum coding upstream 165494 38322444 ~ 38359333 (+)
XLOC_017526 ccl38.6 coding upstream 232875 38257766 ~ 38291952 (+)
XLOC_017533 gtf3c2 coding downstream 4320 38543314 ~ 38584161 (+)
XLOC_017534 NA coding downstream 51514 38590508 ~ 38598879 (+)
XLOC_017535 si:ch211-243j20.2 coding downstream 81672 38620666 ~ 38670696 (+)
XLOC_017536 mpv17 coding downstream 132900 38671894 ~ 38716529 (+)
XLOC_017537 uts1 coding downstream 185581 38724575 ~ 38727396 (+)
XLOC_017524 NA non-coding upstream 386404 38128054 ~ 38138423 (+)
XLOC_017520 NA non-coding upstream 682821 37836126 ~ 37842006 (+)
XLOC_017515 NA non-coding upstream 919702 37495088 ~ 37605125 (+)
XLOC_017511 BX855623.1 non-coding upstream 1244045 37256654 ~ 37280782 (+)
XLOC_017538 BX511178.1 non-coding downstream 235978 38774972 ~ 38775087 (+)
XLOC_017541 NA non-coding downstream 509065 39048059 ~ 39195117 (+)
XLOC_017544 AL845306.1 non-coding downstream 792975 39331969 ~ 39332092 (+)
XLOC_017552 NA non-coding downstream 1309717 39848711 ~ 39882360 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000029_01653157_01657944 NA coding CI01000029 null 1652840 ~ 1658005 (+)