LOC110507802 (LOC106573603)


Basic Information

Item Value
gene id LOC110507802
gene name LOC106573603
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 21605024 ~ 21631294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588109.2
ACAGCCTACCTTTGAAGGGATGGATGCTGATGATCTTCAGCGCACGCCTCCTCCAGCTCTTCAATCACTTACGTCACGTGGTGCGTCCCGGGTGGTGGGTGTGGCTTCAGCCATAGGGTTTCATTCATAAATAGTTTTTGCTTTTAAATCAGACTTTAAGTGTTCGGCGAAGGTTTTGGCGCTATTGGCTTCTGCCTAAGTTCCCTCACATGGACCACCTCAATTTTAATTAGCTGAGCTTCTGGTCAGAGTCTAGGCAAGCCTATGTTGAGAGGACAAAATAGCCCTGAGGAGGCTGGCCAGCCAGGTGGGTGGGCAGAGGCAGGCTGAGAATGCAGCAAGGGAGCTGAGGAAGATCTGAGCAGGGAGACATCAACATCCAGAGCTGCTGCACACAGCCCTCCATCAGGGGGGACGCTCACGCTCGCCTGGACCATGAGCAATGAGTCTACCGTCTGGATCAACCTCACCGAGAACTCCACCGGGGTCCCATTTGAGCCTGGTAAACAACAGGATGGTTACATCCTACTGCTGGTGCTCCTGTCCATCTTCCTGGGGGGAACACTGGTCCTGCTGTCTGTCCTGCTGATCATCTGCAGACGTTGCTGTGATGGAGACTGCCGCCATGCCAGGGCCAGCGATGACCCTGAGAaaaccaacaccagctacatggAGGAGTCTCAGCCAGTACATGgacagatcaCCATCCGTGTAGACGAGTCAGACTGCCTATCGGCCGCCAGCTCCCACGTGGACATGGAGACAGAGCGCTTCCTGTCCACAGGCACCCACGGTGGCCGCCGAGTCTCTTTCAATGAGGTGGCACTCTTCGACCACGGCAAGAAGGCCCAGGAGAAAGGCCGTAGATTTACGTTGACTGAGGGTGACTTCCACCACCTGAAGAATGCGCGGCTCACACATCTCCACATCCCACCACTGGCCCTCAAGATCGTCACCATCCACGAGTGTGAgtcatctgagaacagcatcgcCATGACGACCTGCCCCGCCGCCAAGTCCAGCCTCTCCATCTTCCAGccgCCTTTGTGTGCCCGACGGCCACTGTGTCCCCTGCCCCAGACAGCATTGACCAGTCTCAGTGTCAGCCCCAGTTCAGCCCTCCCTGGGGACACCCTTAACTCGGTGGTGGACACCAGCTTCAGTGAGAGTCCCTTGGCACCGGGTCCCAAGGAGCCCAGCACCAGCAGCattGAGGTGATGGCGTCTGGCTCCAGGAATGGGGGAAGTCCGTCTTTGAGTGAAGGGGCGTCGGTGACGTCTGTGACAGGTGCATCTCCTGGCGCAGGGGTGGGGCAGGGCCCGGTGCTGCAGTTCTTCACCAAGCTGAGGCGCCACGCCAGCCTGGAGGGAGCCAGCCCATACTTCAAGATCAAGAAGTGGAAGCTAGACAGCAGCCAGCGGGCCTCCAGTCTGGACACCAGAGggTCCCCTAAGAGGAGGCAGTTCCAGCGGCAGCGCGCTGCCAGCGAGAGCATGGACCAGGAGGATAGCGACGCCCACCACATTGACCTCATCCAGTACATTGCCAGGACCCAGGATGCCACCTATCACCCCTGCCGCCCCTCTGCCTCGGCCTGCCTCCtgccccactcctccccctccacgCCACCACCCTCCCTCGGCAGgttagaggtggaggtggtggtggaacCCAGCTGCAGCAGGGGCCAGGGGCTGGAGGTGATCGGCTTGTCCCCGGAGCCCCAGGACGAGGCAGCGAGCCTGGGGGACTGTAGACCGGAAAACTCGGCATCAGACCACCAGGCCCTGTACAGAGACATCTGGACACTCCGGGCCTCCCTGGAGCAGTATGGCTCCTCAGACCAGATCAACAACAATGACAGGGACTCTGTCCGCAGCGATGCTGACAGTGTCTGCTCTCTGAGGGGGCAGACCAAGAGGGGGGGGCTAACCAGTTACCTCTCCCAGGACATCGGGGATGGGCCCGAGGGGGATGTGGAGCTGCccatggatgaagggatgggagagaaggagaaaggggggAAGCATGACAGTGTGGAGTCAGAGAGGGGCAGTGACGGGGAGTCAGGGAACCGTAAGTTAATGCAGATGGACAGTGGCTATACATCTATAGAGGCTCCATCACGGGCGCCGGAGGAGCTGAGACTGTTTGGCAGTAGTGGCAGCAGTGGCAGTATAGACAGGACGGCCCTGGAGAAGAGACACTACTTCACCAGTGCAGGGGGCACTGGCACAGTGGTTGAGAGCTTTGAGGCCCGCATCTTCGAGGAAGAGCCAGACGAGGAGACGCCGGCGGGTGCAATGGGCGGCATGACCATAGAAACGGCCAGGTCTCCCCTGGGCTGGTCTCCGTACGGTCAGATGTTCACCCCGCGAGAGGCGCAGCCGCAGCCGCACCCCCAACCCCCCTTATCAATTCACCACCGTGACTACAGCATCGACGAGAAGACGGACGCGCTCTTCCACGAGTTCCTCCGCCACGACCCCCAGTTTGACCAGCAGGAGACGCCGAAGAAACATCGGTCGCGCATCCACCTCCGCAAGCAGTGGCAGCGCCACAAGCAGTACAGTGACCCAGGCGTTCGCTACCAGTACCACTCCTTTGAGAGGCAGCGGACCCCCCTGCGACGTGGCGATAGCGTCAACTACCCGCTGGACACAGGCTACCACAGCACGCTTCCACGCATCATCAGTGCGCCTGACGAGGAGGCCAGCGAGGGGACCCCCAGCACCCCCCTGACGCCCAAGGCTGAGGCGGTGGTGGCGGGAGGGGCAGAAGGTGCCGAGGTACAggaaggagacaggagagagagtccCAGCAGTAGCTGTGGCAGTAGCACCGTGACCATCACAGACGACAAAGGGATGGCGTCCtgttcccctccccctcccccggAGAGAGAGGGTCTGCTATGGGAGCAGCCCGACCCCCAGGAGGACACTACGCAGGCAGAACACCCCCCTGAGCCACCTGACGAGCCCCCCCAGCCCCCTGTCAAGGGCTACGGCCCACAGACCATCACAGCCGAGCTGACGGACAAGCTGAGCGCCACCCTGGACGAGCGGCTGTACACGGGCCTGCGACGGACAAAGGACCCGGCGGCGGTAACTGAGTGTGTGGTGACAGTCACTCACGCCTCCCCCGACCACAGCCCAGTGTAGCATGTCTCcagtcctcctccactcctccctgatctttgtgtttgatttgatttcagtcTGCGCCAGGTAACTGCGATGACTCTGTATCTGTCTGAATTAGCATGTTCCAGACCCGTAACATGAAAACAGGCTACACTATACAGTGTCATGTAGGCTAGCTGAAGAATCCACCCCTAGATAGTGTCTACAGTACCGTGGTGTCTCTGACTGCTATGATTCCTTTCTCCTCTGAGAGAAGTGACGATGTTAAAGGGAAACACCACTCAAACTATCCTTTGGTattttttttcattagtccactgttgatacagtaccaaaatgttttgcatgtcagccgTCCGGTTTccaagatattggactttcaaaAAGCAAAGTGTCACCGGCCAAGATGACGCTTTGCTTCTTGAAAGGCCAataacattttgggactgtatcaacagccGATTAATGAAAAGAAAGTAGAATAACTGTGGATTTTCCCTTTAAGAGCCAGTATGCCCTCTGAACTAGTCTATCCACTGTGAAACCAGGTGCTATTAAACATCTAAAGATCTGGATACAAAGTTTATCTGGGCCCTTTAGGCCAGTCCTGGCTGAATATCAAAATAGGTTTATCTATGTTTACATCACTTCATCACTTCATTTCTTAAATATGGCTCTGGATTTCTGTTGTCTTTGGCCATTGACATATATCAAATTCTTTCCATGTGGCATTTTGACTCTTGAAGTCGTCATAATTGTTTTACAAATAATTAGGTCTCCCTGATATTTTTTCGAAGCCAAATTTGACATTGTCCACATGTTTCTCGGGACATATGAATATAGTAATCTACTACTTCAGTACCGTATTGGTCATTAATTGAAGCAATCCTGTAAATTGTAATGTATGATTGAATGTTTTTGGACAGATTTCTGTTGAATCTTGATGTACTTGAATCAGAATCTATGGTACTAGGAACAGAAAACAGTCGACCATAGATTTGATGATGAAGATGAATTGTTTCTCATACGCTGTCATTAAATGGATATGACGAGGGCCGAGGTTCTCCTAATTTGGACACTGACTATATTACAGCATTTATATAATTACAGCCTCATCATGTCCACTCTGGATCAGAGCATTATCCTTCGTCAAATGTCCTTGTCGCTGAATGTCTGGACTCATGTTTCTATTCAAAGATGTTCTTAAAGGGGAAAATTGCTTTCCAGAAAAGTTCTGGTTGTTAGGACATGTTGTTCAATACCGTTGTATTTATTGTTGACAGATTTGATTTAAATGTGTCTATGCTCGTCTTATATTTCTTCTGCTTGTGACAATAAGTGGCTTACAGGAGGCCAGGGTGAGAGTTAAATTCCAGGCTTTTGCCTAATTTCTGTGCCAGAAAAACCCTGTCTGCAAATAAAGGGATCGCAATAGTGTTACTGACAACTCTGTTAGGCGCACATATCAAAGGCAGGCTCCTTTGCCCCCCCCCAACAGTGTTGGTCAGTGCAGGTCTATAGCTGTAACAGTTTAAATTAAGGCTTTGAATGGGGCCAATGTTGCTCTCGCAGACATTTGcgttcattgaatttcttcataCTTTCTCGTGCATGGATTCACCGAACAGGCTTTTTTTGTTTGCTTATATTCTTTTGTTTCCCCCTCCTCCTGTGAAAGTAGACAACGCAGCAGCGATCCCCCTGGGCTATAAGGACTGCACTTCCAAACCAGAACAAATTCCACATTTTCTCCTCTGACTTCCTCTGTGTAGACTTTGCCACCCAATGCTGCCATTCAAGTATAACCACATTATCAGATTATGTTTTATGGGCCAAAAGAAGGCAAGGAATGGCATGCCCATTCCAGAAGTACCTTGGAAACTATTTTGCACTTAGCTGTGTAATGGCTGGGAGTGTGCTGCATCTCCCACATGCTACAGTCAGCAGCTCCGGCTCCCAGCTCTCTGACCCAAACTGTAAAAATAATCCTGTTGTTTTTACGGTAACTTACTGGCAGCCAGTTACCTGTAAGTTACTGTAATAAAAGGTACTGTATGTTACCATAAATTCAAAATAAACTTTGGtttaacagtacattactgtaaacttTATCCCCAGTTTCCTCAGAAGCTAGTTATTGCTTTACGTTTAGAGGAAAGTGCTGCAGGAAAAGGTGCTGAATATGGTCTCTGGCTGAGGGTATAACACAATTAAGATTAAgatcactttattggtcaattgGTCACAAGGTCCAACCAAAATGTGACTTCTGCTTTATCCCAACCCCCCcgaaagacacacatacagataattgcaAAATGATGGATTCAAtgtatattgaaagcagatgcttccacacaggtgtggtttctGAGTTAAACGATTAACATCCAAGCATGCGTAGGGTCATTTatcagacttgcctagttaaataacaatttaaaataaataaatgtataaaagTGCTGGggaggccattattttggctaccatggaaTCGCTCCCAtagaatgacaatgcccccatccacagggcacgagtggtgactgaatggtttgatgagcaggAAAACGATGTGAACCAtttgccatggccgtctcagtcactagatctcaacccaatttaaCTCTTACagtatgggagattctggagcggcgcgggagacagtgttttccaccaccatcaacaaaacaccaaatgatggactttctcatggaagaatgatgTGGCATCCCTCCAAGAGTTCCAGACCCTTGTAGAATCTAtgacaaggtgcattgaagctgttctgcctcatggtggcccaacaccttattaagacactttatgttggtgtttcctatattttggcagttacctgtacacacacacatacatatatatatatatatatatatatatatatatatatatatatatacacacacacaggttggagCAGGGGGCTGCCACACTGGGCACCTGTGGAGCAGATGTGGGGGAGTTAAGTCCCTTGATCAAGGGCACAACAAcaggcaatggcatctaggatttgatatTAGCAACCCTCCGGATGCCAGCTCCAGTCCTGACAGATTTTTCCCAGCAGACCTGGGACTCAAACTGGCAACCCTCCGGATGCTGGCTCGcctctctaactgctaggctacctgccattgCAATAAAGATAGGCGTTTCTGTAATTGGGAAAGAGGGAGATATTTCTAGCTGTCATTTCCCTATGTTTGGGTGTGATTGTGCTACTTCACAGCCCTGGGGAATCAGATCTGTTTCCTCTAACATGGAGATCAGGCAGCTCCTTGTTATAGCAGAGTGGACTCACAGGCAGAAGGCACCTTTTCCCTCATTAGACAAAGAATGGTCAAGATGAAAGGTGGTGAGAGGGCTTGAATTTGTCTTCTAGCGTGGAGAGGCTAGTGATATCCTTCCTTTCTGTCTCCTTCACTTAGCCCACACATCAGTGCACATTACGTCACCATGGGAAACCCAGGGGCTTCACATGTTTCAGCACCATTTTGTGTTATTACCAGGTGCCTTTATGGAGGTGTTGGAACATCATCAAGGAAGGAAAAAGACCGATCTTTCAGCCAGTCATCTTAGGAACAAACAAGATCAGATGCCTTTGAGGTTACTGGTTACTTAAcattttctgattattgtcagaAATTAGAGGAATAGTGCATCATTTCTGCCATTTAGTTGAATTGATGGAAGAAAGGGGGTGATAACACCAACTTAATGAAAAAGACTAGAGGGGCGAACAAATTAGTACATTTGTACAAAAAGTTACTTTGTTGTGAGATACAAGCACAATGTTGGAGGAGCTAATGTAGTCTATGTCTTTTATTCGGTGTAGACGTAACTGGGGACACTGGTCATATACTTTTTGTATACGAACAAGTAGCCTGTCCAATGCATTGATGCATTACGGTGCATAGGTTTGCATGACAATTAATAATTTTAATACGTATCTCCATGTTTCTCAGAACTACTGTACCAAATGATTCCATGGTTGTTGGTTGACACTTTTGAGGCAGAACATAGACATTTAAATCAGCACTGGTACTTCTAGAGGTTTTGTATTCTATGACATGTACCTTTGTTTAGGAGTCATGCAATGCTAAATGATATGCTATGATTGTGAGATTTATTTCCATGAaagaaaaacatatatatttctgTATTCCTGCTTGTTAGTTATTACTGCTCAATTTCTCAAAGAACTAGTTCAAAAAAGTAGAGCTTTATAAACAACTTAGCCTTTGTTGACCCCTACCTATTTGAGCCTTGAGGGACCAAACAATTGAAAATGTTATTTTGGGGTTTTCCAATCAGTAAATAAATGAATGAAGCA

Function

NR:

description
voltage-dependent calcium channel beta subunit-associated regulatory protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588109.2 True 7501 mRNA 0.49 11 21605024 21631294

Neighbor

gene id symbol gene type direction distance location
LOC110512702 LOC106573599 coding upstream 249166 21353302 ~ 21355858 (+)
LOC110507602 LOC106573596 coding upstream 301963 21271127 ~ 21303061 (+)
LOC110507530 LOC106573595 coding upstream 337370 21194656 ~ 21267654 (+)
LOC110507450 LOC106573594 coding upstream 413843 21148112 ~ 21191181 (+)
LOC110507137 LOC106573592 coding upstream 463173 21134277 ~ 21141851 (+)
LOC110508215 LOC106573607 coding downstream 102300 21733594 ~ 21747189 (+)
LOC110508358 LOC106573608 coding downstream 148447 21779741 ~ 21785244 (+)
LOC110508526 bsg coding downstream 161162 21792456 ~ 21802903 (+)
LOC110508592 LOC106613751 coding downstream 178270 21809564 ~ 21911516 (+)
LOC118946025 LOC106604946 coding downstream 187895 21819189 ~ 21827129 (+)
G20783 LOC106613744 non-coding upstream 624 21587199 ~ 21604400 (+)
G20761 NA non-coding upstream 71593 21533223 ~ 21533431 (+)
G20746 NA non-coding upstream 141787 21463027 ~ 21463237 (+)
G20742 NA non-coding upstream 144649 21460064 ~ 21460375 (+)
G20741 NA non-coding upstream 145165 21458954 ~ 21459859 (+)
G20799 NA non-coding downstream 4203 21635497 ~ 21637361 (+)
G20800 NA non-coding downstream 52101 21683395 ~ 21684298 (+)
G20810 NA non-coding downstream 62959 21694253 ~ 21699285 (+)
G20848 NA non-coding downstream 128407 21759701 ~ 21765187 (+)
G20880 NA non-coding downstream 200616 21831910 ~ 21832960 (+)
G20773 NA other upstream 36836 21567545 ~ 21568188 (+)
G19400 NA other upstream 1295126 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 1328129 20276590 ~ 20276895 (+)
G19359 NA other upstream 1362149 20242645 ~ 20242875 (+)
G19083 NA other upstream 1689192 19915586 ~ 19915832 (+)
G23109 NA other downstream 1907102 23538396 ~ 23538863 (+)
G23135 NA other downstream 1943298 23574592 ~ 23574995 (+)
LOC110511358 LOC106573633 other downstream 2241727 23872914 ~ 23905175 (+)
ccl4 ccl4 other downstream 2873361 24504638 ~ 24506125 (+)
G24123 NA other downstream 2919231 24550525 ~ 24552435 (+)

Expression


Co-expression Network