G21214


Basic Information

Item Value
gene id G21214
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 21952531 ~ 21952872 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU24699
GTCTCAAGACATCACTAGgaaaatctggcccaaccaaatcatcacaaaacaaaaataaaaatataccaccttttggaaagacaccacaaacaaatctaagtaaacttcaatactatttggctctaaacagacagttcatggtggcagactatctgaccactgtgactgaggaaaacactgactaggtacagactcagtgagcacagtctggctatagagaccggtcttCACaggcaaacctggctgcccagagaggacaggctgtgctcactctgctccaggggagaagcagagacagagcTACATTTCCTATTTCACAgtaacaaatactcagacctaaga

Function

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24699 True 342 lncRNA 0.44 1 21952531 21952872

Neighbor

gene id symbol gene type direction distance location
LOC110508592 LOC106613751 coding upstream 41015 21809564 ~ 21911516 (+)
LOC118946025 LOC106604946 coding upstream 125402 21819189 ~ 21827129 (+)
LOC110508526 bsg coding upstream 149628 21792456 ~ 21802903 (+)
LOC110508358 LOC106573608 coding upstream 167287 21779741 ~ 21785244 (+)
LOC110508215 LOC106573607 coding upstream 205342 21733594 ~ 21747189 (+)
LOC110508655 LOC100380741 coding downstream 71757 22024629 ~ 22107857 (+)
LOC110508905 twf1 coding downstream 259460 22212332 ~ 22226104 (+)
LOC110532091 LOC106573613 coding downstream 328217 22281089 ~ 22422282 (+)
zgc:110339 LOC106573615 coding downstream 479438 22432310 ~ 22435150 (+)
LOC110513869 LOC106560949 coding downstream 667794 22620666 ~ 22623478 (+)
G21210 NA non-coding upstream 3987 21948188 ~ 21948544 (+)
G21203 NA non-coding upstream 13202 21939123 ~ 21939329 (+)
G20920 NA non-coding upstream 65447 21886629 ~ 21887084 (+)
G20880 NA non-coding upstream 119571 21831910 ~ 21832960 (+)
G20848 NA non-coding upstream 187344 21759701 ~ 21765187 (+)
G21229 NA non-coding downstream 10067 21962939 ~ 21963157 (+)
G21299 NA non-coding downstream 99213 22052085 ~ 22052352 (+)
G21528 NA non-coding downstream 287019 22239891 ~ 22243715 (+)
G21533 NA non-coding downstream 296479 22249351 ~ 22249637 (+)
G21545 NA non-coding downstream 314883 22267755 ~ 22267975 (+)
G20773 NA other upstream 384343 21567545 ~ 21568188 (+)
G19400 NA other upstream 1642633 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 1675636 20276590 ~ 20276895 (+)
G19359 NA other upstream 1709656 20242645 ~ 20242875 (+)
G19083 NA other upstream 2036699 19915586 ~ 19915832 (+)
G23109 NA other downstream 1585524 23538396 ~ 23538863 (+)
G23135 NA other downstream 1621720 23574592 ~ 23574995 (+)
LOC110511358 LOC106573633 other downstream 1920149 23872914 ~ 23905175 (+)
ccl4 ccl4 other downstream 2551783 24504638 ~ 24506125 (+)
G24123 NA other downstream 2597653 24550525 ~ 24552435 (+)

Expression


Co-expression Network