XLOC_020035 (CU896630.2)


Basic Information

Item Value
gene id XLOC_020035
gene name CU896630.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 2562101 ~ 2676627 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039974
atgagtgatccagaaccctgcagaattaaacaggaagacactgaagaactaatagAGCTGATGGTGAAAGAGGAAAGTGAGGATCTGAGTGAATCCGAGAGGCATACGGTGAGAGCTGATATAAAGAAGCCACATTCGTGCTCTCTGTGTGAAAAGAGCTTTGCATATCAGTCACTTCTAAGACAGCACAAGatgactcacactggagagaaaccgtacacatgcactcagtgtgggaagagtttcacgcAGTCATCATCCCTCACTCGACACATgctgatccacaccggagagaaaccgcaCAGATGTGATCAATGCGGCAAAACATTTCTGAGGCCTTCAGAGCTGAAGGAGCATCTCGAAGCTCACAGAAGTGAAAAGCTCTACTCGTgttctgagtgtggaaagagGTTTACGCATAAGCAAATCTTACGAAAACAtgagaagatccacactggtgtgagagagcaTGCGTGCTTCGAGTGTGGGAAGAGCTTTATTAAATCTGGAGACCTGAAACGACACCAGATGatccacactggggagaaaccttgtgtgtgttcacactgcaacaaGAGATTCACTCTGCTAGCGGCCCTGAAAAtccatgagaggattcacactggagagaaaccgtacgaGTGTTCGCACTGCGGCAAGAGATTCATTATATCAGGACAGCTGAAAACACACAAAaggattcacactggggagagaccctacacatgtactcagtgtgggaggagtttcaatCAGTCATCACACCTCAGTCAACACAagctgatccacactggagagagaacaCACAAGTGTGATCAATGCGGCAAAACATTTTTCAGTGCCTCAGATCTGAAGAAGCATCTCCGAGTTCATCAAAGAAGAAGTCTTAAACAAAATTCGCCTTCCTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100883

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039974 True 909 mRNA 0.46 2 2562101 2676627

Neighbor

gene id symbol gene type direction distance location
XLOC_020034 zgc:175284 coding upstream 3522 2549044 ~ 2558579 (+)
XLOC_020033 NA coding upstream 15223 2546086 ~ 2546878 (+)
XLOC_020032 si:ch73-92e7.4 coding upstream 23410 2533514 ~ 2538691 (+)
XLOC_020031 znf1003 coding upstream 32118 2524615 ~ 2529983 (+)
XLOC_020030 zgc:173726 coding upstream 40245 2510828 ~ 2521856 (+)
XLOC_020041 zgc:194221 coding downstream 4268 2680895 ~ 2682759 (+)
XLOC_020042 si:dkey-20i20.15 coding downstream 9256 2685883 ~ 2870110 (+)
XLOC_020043 znf1171 coding downstream 32840 2709467 ~ 2712891 (+)
XLOC_020044 znf1163 coding downstream 39188 2715815 ~ 2718913 (+)
XLOC_020045 si:dkey-20i20.11 coding downstream 75260 2751887 ~ 2758749 (+)
XLOC_020000 NA non-coding upstream 271444 2007241 ~ 2290657 (+)
XLOC_020048 NA non-coding downstream 115948 2792575 ~ 2795451 (+)
XLOC_020050 NA non-coding downstream 137836 2814463 ~ 2827856 (+)
XLOC_020054 NA non-coding downstream 245524 2922151 ~ 2927616 (+)
XLOC_020058 NA non-coding downstream 433409 3110036 ~ 3110513 (+)
XLOC_020061 NA non-coding downstream 542376 3219003 ~ 3222417 (+)

Expression


Co-expression Network