Gene
RNA
| Item | Value |
|---|---|
| gene id | G42887 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 39870586 ~ 39870823 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU48178 | True | 238 | lncRNA | 0.45 | 1 | 39870586 | 39870823 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnar-ucg | NA | coding | downstream | 129101 | 39741413 ~ 39741485 (-) |
| LOC110522570 | NA | coding | downstream | 134646 | 39718042 ~ 39735940 (-) |
| LOC110522551 | LOC106573324 | coding | downstream | 251918 | 39596545 ~ 39618668 (-) |
| LOC110522541 | LOC106573325 | coding | downstream | 287403 | 39580837 ~ 39583183 (-) |
| LOC110522519 | LOC106573326 | coding | downstream | 307357 | 39553431 ~ 39563229 (-) |
| kras | rask | coding | upstream | 626558 | 40497381 ~ 40513885 (-) |
| bhlhe41 | LOC106573310 | coding | upstream | 694496 | 40565319 ~ 40568730 (-) |
| LOC110522681 | LOC106573309 | coding | upstream | 719269 | 40590092 ~ 40750790 (-) |
| eea1 | LOC106573307 | coding | upstream | 919247 | 40790070 ~ 40833456 (-) |
| nudt4a | LOC106573306 | coding | upstream | 978693 | 40849516 ~ 40879189 (-) |
| G42883 | NA | non-coding | downstream | 2775 | 39867584 ~ 39867811 (-) |
| G42876 | NA | non-coding | downstream | 11974 | 39853154 ~ 39858612 (-) |
| G42866 | NA | non-coding | downstream | 34628 | 39835729 ~ 39835958 (-) |
| G42863 | LOC106573315 | non-coding | downstream | 38341 | 39832017 ~ 39832245 (-) |
| G42835 | NA | non-coding | downstream | 76566 | 39788970 ~ 39794020 (-) |
| G43089 | NA | non-coding | upstream | 111628 | 39982451 ~ 39983876 (-) |
| G43132 | NA | non-coding | upstream | 174169 | 40044992 ~ 40045244 (-) |
| G43165 | NA | non-coding | upstream | 191407 | 40062230 ~ 40062442 (-) |
| G43209 | NA | non-coding | upstream | 230037 | 40100860 ~ 40101124 (-) |
| G43214 | NA | non-coding | upstream | 239087 | 40109910 ~ 40110244 (-) |
| G41868 | NA | other | downstream | 848561 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 1678850 | 38187488 ~ 38191736 (-) |
| G40732 | NA | other | downstream | 1744861 | 38125280 ~ 38125725 (-) |
| G40079 | NA | other | downstream | 2153553 | 37716540 ~ 37717033 (-) |
| G38855 | NA | other | downstream | 3359757 | 36508538 ~ 36510829 (-) |
| tspan9a | LOC106573177 | other | upstream | 3167905 | 42852829 ~ 43129052 (-) |
| G49774 | NA | other | upstream | 5849982 | 45720805 ~ 45721124 (-) |
| G49962 | NA | other | upstream | 6078135 | 45948958 ~ 45949951 (-) |
| G51214 | NA | other | upstream | 7193951 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 7418116 | 47288939 ~ 47289681 (-) |
