LOC110522551 (LOC106573324)


Basic Information

Item Value
gene id LOC110522551
gene name LOC106573324
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 39596545 ~ 39618668 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601007.2
GCATACATTGGGTATTTGAAGAACAGGAAACAAACCTTTCAACAGCGTAAAGAAACGTGAAAATTGTGAACGCTGCCGAAACATCAGAATACGTATACATCGGCAGATAACAGAGATAGAAACAGCAACGAAAAGTAGTTTTCAAGTGAAGTAATAGTGCTGCTGAGAAACAGTTTGTTTGGCTAGCCTGGGTGCGAGGCAAGGGTTGTGTTTGAATCTCCGACTCGAGGGAGTCGCCCTCCTTTTAGCTTGTGCATGTTGAACGTTTTATCTTTTTAACTTTTACACCTTTTGGGGAATCTGCTTGAAGATGGGGTGTACTCTGAGCACGGGTGATAAGGCGGCGCAGGAGCGCAGTAAAATAATCGACAGGAATTTACGGGACGACGGGGAAAAAGCAGCACGAGAAGTCAAGCTGCTTCTGCTCGGTGCTGGGGAGTCAGGGAAGAGTACCATTGTCAAACAGATGAAgaTCATCCATGAGGCGGGCTATTCAGAGGAGGAGTGTAAGCAGTACAAGGCAGTGGTGTACAGCAACACCATCCAGTCCATCATCGCCATCATCAGAGCCATGGGGCGCCTCAAGATAGACTTCGCTGAAGCAGCCAGAGCGGATGATGCTCGTCAGCTGTTTGTGCTGGCGGGATCGGCAGAGGAGGGCTTCATGACCGGTGAGCTGGCCGGAGTCATCCAGCGCCTCTGGAAGGACGGTGGGGTCCAGGCCTGCTTCGGCCGCTCACGAGAGTACCAGCTCAATGACTCCGCTGCCtaTTATCTGAATGACCTGGACAGGATAGCCCATGGAGCGTACGTGCCCACCCAGCAAGACGTGCTGAGGACCAGGGTGAAGACCACCGGCATCGTGGAGACTCATTTCACCTTCAAAGACCTCCACTTCAAAATGTTTGACGTGGGGGGTCAGAGGTCCGAGAGGAAGAAGTGGATACACTGCTTTGAGGGAGTCACCGCCATCATCTTCTGTGTGGCGCTCAGTGACTACGACCTTGTGCTGGCcgaggatgaggagatgAACCGGATGCATGAGAGCATGAAGCTATTTGACTCCATCTGCAACAACAAGTGGTTCACAGACACCtccatcatcctcttcctcaacAAGAAGGATCTGTTTGAGGAGAAGATCCAAAAGAGTCCGCTCACGATCTGTTACCCGGAGTACGCAGGCTCCAACACGTACGAGGAGGCAGCAGCCTACATCCAGTGTCAGTTTGAGGACCTGAACAAGAGGAAGGACACCAAGGAGATCTACACCCACTTCACTTGCGCCACCGACACCAAGAATGTGCAGTTTGTCTTCGACGCAGTCACCGATGTCATCATCAAGAACAACCTGAAGGACTGTGGCCTCTTCTAGGGCAGTGTGGTGGCCAGCGTGTGTTCAGTGACCATTTTCTTTGGGATGTCTGTGGCTGGAGGGGGTTGGATCATGGACACTTTGTAGAGAACTTCACTTTTAACCTCTTAACTTCAAACTCCGTTTTTAAAATGCCATGTGGAAAAATGTTTGTGTAAAATATTTGTACAACTGTCACTATGGCTGGAGATTTTCACTGTTTTTAAGATGTTTTGTTTTAACCGGTCAAGTTATTTGAAGGATGGAGGGGGGACTTTGCATTTGTTTCTTCTAGGAAAGGAATGGACACATTTTTCTGTTTAGGTACTTGCGCCTTTGCATGCCTTAGttccagtgttttgttttttgggctagatggtagatgttaTAATtgaataacccccccccc

Function

NR:

description
guanine nucleotide-binding protein G(i) subunit alpha-1-like

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function

KEGG:

id description
K04630 GNAI; guanine nucleotide-binding protein G(i) subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601007.2 True 1763 mRNA 0.49 9 39596545 39618668

Neighbor

gene id symbol gene type direction distance location
LOC110522541 LOC106573325 coding downstream 13362 39580837 ~ 39583183 (-)
LOC110522519 LOC106573326 coding downstream 33316 39553431 ~ 39563229 (-)
LOC110522511 LOC106573329 coding downstream 48806 39543494 ~ 39547739 (-)
si:ch211-59o9.10 LOC106573327 coding downstream 53234 39530168 ~ 39543311 (-)
c1h15orf40 cssa16h15orf40 coding downstream 110536 39481601 ~ 39486010 (-)
LOC110522570 NA coding upstream 99374 39718042 ~ 39735940 (-)
trnar-ucg NA coding upstream 122745 39741413 ~ 39741485 (-)
kras rask coding upstream 878713 40497381 ~ 40513885 (-)
bhlhe41 LOC106573310 coding upstream 946651 40565319 ~ 40568730 (-)
LOC110522681 LOC106573309 coding upstream 971424 40590092 ~ 40750790 (-)
G42695 NA non-coding downstream 80619 39515068 ~ 39515926 (-)
G42674 NA non-coding downstream 103680 39492631 ~ 39492865 (-)
G42673 NA non-coding downstream 104024 39492311 ~ 39492521 (-)
G42670 NA non-coding downstream 107140 39489066 ~ 39489405 (-)
G42668 NA non-coding downstream 108097 39488032 ~ 39488448 (-)
G42835 NA non-coding upstream 170302 39788970 ~ 39794020 (-)
G42863 LOC106573315 non-coding upstream 213349 39832017 ~ 39832245 (-)
G42866 NA non-coding upstream 217061 39835729 ~ 39835958 (-)
G42876 NA non-coding upstream 234486 39853154 ~ 39858612 (-)
G41868 NA other downstream 574520 39021805 ~ 39022025 (-)
G40768 LOC106573348 other downstream 1404809 38187488 ~ 38191736 (-)
G40732 NA other downstream 1470820 38125280 ~ 38125725 (-)
G40079 NA other downstream 1879512 37716540 ~ 37717033 (-)
G38855 NA other downstream 3085716 36508538 ~ 36510829 (-)
tspan9a LOC106573177 other upstream 3420060 42852829 ~ 43129052 (-)
G49774 NA other upstream 6102137 45720805 ~ 45721124 (-)
G49962 NA other upstream 6330290 45948958 ~ 45949951 (-)
G51214 NA other upstream 7446106 47064774 ~ 47236625 (-)
G51285 LOC106561952 other upstream 7670271 47288939 ~ 47289681 (-)

Expression


Co-expression Network