XLOC_021084


Basic Information

Item Value
gene id XLOC_021084
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 18993839 ~ 18998174 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042391
CGTCAGAGAGCTTCATGCCAATATTCCCTTTGGTCAGGACACTGACTACGCCGTGCTGAATAAAGTACATCTTTTTGCCGATGGTTCCCTCACGAATGATGTAATCTCCTGGTTGGAAGACCTCGAAGCGCAGCTTGGTTAGCATTGCTGTCACAAAGTTTGGATCTGCGTTGGCGAACAGCGGCATGGACGCCACCAGCTTCCGGCAGTTGAAGTTGACTATTTCCTGAAGGTACAAAAGTTAGTTTATTGTCAAATTGGAGATGAGTAAAGAATTTCTGTAGGATTTTCTAGTACCTCTCGTAATGGTTCGTTCAGTTCTTCCAAAATGCTTTCCTCGTCGAACATCTTTCCCTGGTATCTGTGCTCATAATAGTCATGGATCTTCTGCCGGAAGTCGGCCGGAAGTTTGTGGAAAGACATGTACTGCTCAACTTGCTTgtacttctt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042391 True 450 lncRNA 0.45 2 18993839 18998174

Neighbor

gene id symbol gene type direction distance location
XLOC_021083 NA coding downstream 47245 18942516 ~ 18946594 (-)
XLOC_021082 NA coding downstream 161793 18823190 ~ 18832046 (-)
XLOC_021081 atp5f1d coding downstream 214607 18766061 ~ 18779232 (-)
XLOC_021080 midn coding downstream 244526 18725101 ~ 18749313 (-)
XLOC_021079 BX649276.1 coding downstream 274919 18663099 ~ 18718920 (-)
XLOC_021085 NA coding upstream 8410 19006584 ~ 19011759 (-)
XLOC_021086 polrmt coding upstream 20428 19018602 ~ 19102311 (-)
XLOC_021087 BX927243.2 coding upstream 208147 19206321 ~ 19207487 (-)
XLOC_021088 BX927243.3 coding upstream 216848 19215022 ~ 19216188 (-)
XLOC_021089 BX936298.2 coding upstream 399052 19397226 ~ 19399935 (-)
XLOC_021078 NA non-coding downstream 333882 18591699 ~ 18659957 (-)
XLOC_021077 NA non-coding downstream 447190 18542005 ~ 18546649 (-)
XLOC_021090 BX936298.1 non-coding upstream 431632 19429806 ~ 19429924 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G134277 NA non-coding NC_053124.1 CM020921.1 17387891 ~ 17442212 (-)