XLOC_021088 (BX927243.3)


Basic Information

Item Value
gene id XLOC_021088
gene name BX927243.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 19215022 ~ 19216188 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041433
ACGTGAACAGCTGAACCGAGCTCGCGGCCCGCGTTGTGTATAGCTGTAAAATTTGAGAAATTAGAAGTAAAACAAGCAGTTGAAACTTGATTTAGTTGTTGTAATATACTATTGTCCGTACTCAAACCCCCAATCGCGTTTGGACCAAGGACAGGAATCGTCTGAAGCACAGATCTGATtaggctgtatttttttttttggttcataaGTGATTTTTCTTCAACTATAACTACTATATTTCTTGGTGAGttgggtttttttttgtgtgttcttttCCTCTGTTTTTGTTGTTCCATCTTCTCTGTTCGTGATCCTGACACCTGACATTTGGAGTGTGGAGTTCTAGAAGTCCAAAGTATTCTTGTTTCTGCCATCTTGGAGGACATTCGCTGTTGGTGGAAACTGGCGAGCCGCCCGGTTTTATGGAACCAATATTTCGTGTTGCccaattcatctgattggtaggaaatttgagtttatattttCCATCGTCTATCGGACACAGGAACGACTGGAAGCTAGAGTCATATTTAGTTCTATTTTTCTGGAACTGAGCTACTAATcagtgttaaaacaaaacactgcaacGGGTGCATTATATACATTTGAGTTTATTGAACTGAACTTGAACATTTCGCAACCAAACAGGTGA
>TCONS_00041434
CCGCGTTGTGTATAGCTGTAAAATTTGAGAAATTAGAAGTAAAACAAGCAGTTGAAACTTGATTTAGTTGTTGTAATATACTATTGTCCGTACTCAAACCCCCAATCGCGTTTGGACCAAGGACAGGAATCGTCTGAAGCACAGATCTGATtaggctgtatttttttttttggttcataaGTGATTTTTCTTCAACTATAACTACTATATTTCTTGGttgggtttttttttgtgtgttcttttCCTCTGTTTTTGTTGTTCCATCTTCTCTGTTCGTGATCCTGACACCTGACATTTGGAGTGTGGAGTTCTAGAAGTCCAAAGTATTCTTGTTTCTGCCATCTTGGAGGACATTCGCTGTTGGTGGAAACTGGCGAGCCGCCCGGTTTTATGGAACCAATATTTCGTGTTGCccaattcatctgattggtaggaaatttgagtttatattttCCATCGTCTATCGGACACAGGAACGACTGGAAGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116926

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041433 False 652 processed_transcript 0.39 2 19215022 19216188
TCONS_00041434 True 487 processed_transcript 0.39 2 19215155 19216160

Neighbor

gene id symbol gene type direction distance location
XLOC_021087 BX927243.2 coding downstream 7535 19206321 ~ 19207487 (-)
XLOC_021086 polrmt coding downstream 112711 19018602 ~ 19102311 (-)
XLOC_021085 NA coding downstream 203263 19006584 ~ 19011759 (-)
XLOC_021084 NA coding downstream 216848 18993839 ~ 18998174 (-)
XLOC_021083 NA coding downstream 268428 18942516 ~ 18946594 (-)
XLOC_021089 BX936298.2 coding upstream 181038 19397226 ~ 19399935 (-)
XLOC_021090 BX936298.1 coding upstream 213618 19429806 ~ 19429924 (-)
XLOC_021091 si:dkey-78l4.11 coding upstream 287997 19504185 ~ 19505312 (-)
XLOC_021092 micos13 coding upstream 331288 19547476 ~ 19552803 (-)
XLOC_021093 NA coding upstream 381857 19598045 ~ 19602462 (-)
XLOC_021082 NA non-coding downstream 382976 18823190 ~ 18832046 (-)
XLOC_021094 NA non-coding upstream 406552 19622740 ~ 19638029 (-)
XLOC_021106 BX088720.1 non-coding upstream 1274253 20490441 ~ 20490557 (-)

Expression


Co-expression Network