RNA id: TCONS_00041434


Basic Information

Item Value
RNA id TCONS_00041434
length 487
RNA type processed_transcript
GC content 0.39
exon number 2
gene id XLOC_021088
representative True

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 19215022 ~ 19216188 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CCGCGTTGTGTATAGCTGTAAAATTTGAGAAATTAGAAGTAAAACAAGCAGTTGAAACTTGATTTAGTTGTTGTAATATACTATTGTCCGTACTCAAACCCCCAATCGCGTTTGGACCAAGGACAGGAATCGTCTGAAGCACAGATCTGATtaggctgtatttttttttttggttcataaGTGATTTTTCTTCAACTATAACTACTATATTTCTTGGttgggtttttttttgtgtgttcttttCCTCTGTTTTTGTTGTTCCATCTTCTCTGTTCGTGATCCTGACACCTGACATTTGGAGTGTGGAGTTCTAGAAGTCCAAAGTATTCTTGTTTCTGCCATCTTGGAGGACATTCGCTGTTGGTGGAAACTGGCGAGCCGCCCGGTTTTATGGAACCAATATTTCGTGTTGCccaattcatctgattggtaggaaatttgagtttatattttCCATCGTCTATCGGACACAGGAACGACTGGAAGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000133944

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00042392 lncRNA downstream 203396 19006584 ~ 19011759 (-) True XLOC_021085
TCONS_00042391 lncRNA downstream 216981 18993839 ~ 18998174 (-) True XLOC_021084
TCONS_00042390 lncRNA downstream 268561 18942516 ~ 18946594 (-) True XLOC_021083
TCONS_00042389 lncRNA downstream 383109 18823190 ~ 18832046 (-) True XLOC_021082
TCONS_00042388 lncRNA downstream 496288 18712978 ~ 18718867 (-) True XLOC_021079
TCONS_00042393 lncRNA upstream 381885 19598045 ~ 19602462 (-) True XLOC_021093
TCONS_00042394 lncRNA upstream 406580 19622740 ~ 19638029 (-) True XLOC_021094
TCONS_00042395 lncRNA upstream 1306044 20522204 ~ 20547540 (-) True XLOC_021107
TCONS_00041468 lncRNA upstream 1498897 20715057 ~ 20716028 (-) True XLOC_021110
TCONS_00042396 lncRNA upstream 1903736 21119896 ~ 21121096 (-) True XLOC_021118
TCONS_00041429 mRNA downstream 112844 19018602 ~ 19102311 (-) False XLOC_021086
TCONS_00041430 mRNA downstream 112899 19098533 ~ 19102256 (-) True XLOC_021086
TCONS_00041428 mRNA downstream 435923 18768251 ~ 18779232 (-) True XLOC_021081
TCONS_00041427 mRNA downstream 436167 18766061 ~ 18778988 (-) False XLOC_021081
TCONS_00041426 mRNA downstream 465842 18727900 ~ 18749313 (-) True XLOC_021080
TCONS_00041438 mRNA upstream 288025 19504185 ~ 19505312 (-) False XLOC_021091
TCONS_00041439 mRNA upstream 288037 19504197 ~ 19504690 (-) True XLOC_021091
TCONS_00041440 mRNA upstream 331316 19547476 ~ 19552803 (-) False XLOC_021092
TCONS_00041441 mRNA upstream 333769 19549929 ~ 19552796 (-) True XLOC_021092
TCONS_00041442 mRNA upstream 449457 19665617 ~ 20011604 (-) False XLOC_021095
TCONS_00041431 other downstream 7668 19206321 ~ 19207487 (-) False XLOC_021087
TCONS_00041432 other downstream 7696 19206454 ~ 19207459 (-) True XLOC_021087
TCONS_00041418 other downstream 668881 18542010 ~ 18546274 (-) False XLOC_021077
TCONS_00041393 other downstream 1619835 17589608 ~ 17595320 (-) False XLOC_021063
TCONS_00041375 other downstream 1789359 17425678 ~ 17425796 (-) True XLOC_021054
TCONS_00041435 other upstream 181066 19397226 ~ 19399935 (-) False XLOC_021089
TCONS_00041436 other upstream 182012 19398172 ~ 19399935 (-) True XLOC_021089
TCONS_00041437 other upstream 213646 19429806 ~ 19429924 (-) True XLOC_021090
TCONS_00041448 other upstream 948458 20164618 ~ 20166209 (-) False XLOC_021098
TCONS_00041449 other upstream 949523 20165683 ~ 20166583 (-) True XLOC_021098