XLOC_021087 (BX927243.2)


Basic Information

Item Value
gene id XLOC_021087
gene name BX927243.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 19206321 ~ 19207487 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041431
ACGTGAACAGCTGAACCGAGCTCGCGGCCCGCGTTGTGTATAGCTGTAAAATTTGAGAAATTAGAAGTAAAACAAGCAGTTGAAACTTGATTTAGTTGTTGTAATATACTATTGTCCGTACTCAAACCCCCAATCGCGTTTGGACCAAGGACAGGAATCGTCTGAAGCACAGATCTGATtaggctgtatttttttttttggttcataaGTGATTTTTCTTCAACTATAACTACTATATTTCTTGGTGAGttgggtttttttttgtgtgttcttttCCTCTGTTTTTGTTGTTCCATCTTCTCTGTTCGTGATCCTGACACCTGACATTTGGAGTGTGGAGTTCTAGAAGTCCAAAGTATTCTTGTTTCTGCCATCTTGGAGGACATTCGCTGTTGGTGGAAACTGGCGAGCCGCCCGGTTTTATGGAACCAATATTTCGTGTTGCccaattcatctgattggtaggaaatttgagtttatattttCCATCGTCTATCGGACACAGGAACGACTGGAAGCTAGAGTCATATTTAGTTCTATTTTTCTGGAACTGAGCTACTAATcagtgttaaaacaaaacactgcaacGGGTGCATTATATACATTTGAGTTTATTGAACTGAACTTGAACATTTCGCAACCAAACAGGTGA
>TCONS_00041432
CCGCGTTGTGTATAGCTGTAAAATTTGAGAAATTAGAAGTAAAACAAGCAGTTGAAACTTGATTTAGTTGTTGTAATATACTATTGTCCGTACTCAAACCCCCAATCGCGTTTGGACCAAGGACAGGAATCGTCTGAAGCACAGATCTGATtaggctgtatttttttttttggttcataaGTGATTTTTCTTCAACTATAACTACTATATTTCTTGGttgggtttttttttgtgtgttcttttCCTCTGTTTTTGTTGTTCCATCTTCTCTGTTCGTGATCCTGACACCTGACATTTGGAGTGTGGAGTTCTAGAAGTCCAAAGTATTCTTGTTTCTGCCATCTTGGAGGACATTCGCTGTTGGTGGAAACTGGCGAGCCGCCCGGTTTTATGGAACCAATATTTCGTGTTGCccaattcatctgattggtaggaaatttgagtttatattttCCATCGTCTATCGGACACAGGAACGACTGGAAGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000111258

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041431 False 652 processed_transcript 0.39 2 19206321 19207487
TCONS_00041432 True 487 processed_transcript 0.39 2 19206454 19207459

Neighbor

gene id symbol gene type direction distance location
XLOC_021086 polrmt coding downstream 104010 19018602 ~ 19102311 (-)
XLOC_021085 NA coding downstream 194562 19006584 ~ 19011759 (-)
XLOC_021084 NA coding downstream 208147 18993839 ~ 18998174 (-)
XLOC_021083 NA coding downstream 259727 18942516 ~ 18946594 (-)
XLOC_021082 NA coding downstream 374275 18823190 ~ 18832046 (-)
XLOC_021088 BX927243.3 coding upstream 7535 19215022 ~ 19216188 (-)
XLOC_021089 BX936298.2 coding upstream 189739 19397226 ~ 19399935 (-)
XLOC_021090 BX936298.1 coding upstream 222319 19429806 ~ 19429924 (-)
XLOC_021091 si:dkey-78l4.11 coding upstream 296698 19504185 ~ 19505312 (-)
XLOC_021092 micos13 coding upstream 339989 19547476 ~ 19552803 (-)
XLOC_021079 BX649276.1 non-coding downstream 487401 18663099 ~ 18718920 (-)
XLOC_021093 NA non-coding upstream 390558 19598045 ~ 19602462 (-)
XLOC_021094 NA non-coding upstream 415253 19622740 ~ 19638029 (-)

Expression


Co-expression Network