XLOC_021092 (micos13)


Basic Information

Item Value
gene id XLOC_021092
gene name micos13
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 19547476 ~ 19552803 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041440
AAAACGAACTTTATTGCTACCATTTCGGTTTGCTAGAGCAAATGCCCTTGTCGGTGAAGCTCGCTGACAAAATAGTAAAACAAAGCATCCTGTGAAGTGTTTTGATACGAAATATTGTTCTTTAGAGcataattttgcttttaaaatatggCTGCTAAGATTTTCCCTGTCGTCAAGTTTGCAACAAAAGTGACCATTGCGGGAGGAGCCCTGTATGTGGCATATGATTCAGGACTTCTTGGAGGTAGTAATGAGGGATCTGTGGCCTTGGCCCGAGCTAAATCAGCCATACCACCTGCTGTGGATGAGTGGATGAAGTACTTTGGCTTCGAGctTCCAGCAACCCCCAAAATTGAGTTCTCCCCATTGGATGCTTGGAACTCAGGGGTCCAGAAGTCTATCCACGCTTTATCGGTTGCTCCGTCCACAGTTGGTGACTACACCAAACAAGGCCTGCAATACGTTAAAGACCTGTCAAAATGAATCTTCAGCATTAGTGTAATATGCTGTCAAGAAATTTCAATCATTGAGAAGACTTGGACAAATCAAGAAGCGATTTCCACTTCATATATACATCACAGACTGAATTCCACTCACTTTTGAGAAACAACTATTGGAAATAATGAAGATTCTACTTGTGCAAACCAAAATATGTCCTTGTTTGTGCACATGTTCTCCAGATAGAAATACAATTGTCAAAAATGAACCCTAATTTCAAATAATAAGAGCTCGTTCTTTGTGTATTGTTACTCAACACTTGTATTTATTTGGGAAATCTTTTCCTGGAAATGCTCTGTTCTGGTTTTGTCCCATCTGTAATTTTACAAAA
>TCONS_00041441
ACTTTATTGCTACCATTTCGGTTTGCTAGAGCAAATGCCCTTGTCGGTGAAGCTCGCTGACAAAATAGTAAAACAAAGCATCCTGTGAAGTGTTTTGATACGAAATATTGTTCTTTAGAGcataattttgcttttaaaatatggCTGCTAAGATTTTCCCTGTCGTCAAGTTTGCAACAAAAGTGACCATTGCGGGAGGAGCCCTGTATGTGGCATATGATTCAGGACTTCTTGGAGGTAGTAATGAGGGATCTGTGGCCTTGGCCCGAGCTAAATCAGCCATACCACCTGCTGTGGATGAGTGGATGAAGTACTTTGGCTTCGAGGTATGAAAAGAAATGAAACTAAGTGTATGATTGATACCGAAAGTAGAACTTGACTTTTTGATGAAGTGTAAGGCTACAGTATATGGCAGATGGCAGCACTgacattattgaataaaaagagAGATAGCGGGGAAGTCTTTTGGGTAATTAAATAGTCTTGATGCACAGAAGACTGTTTACATATGGTATTAAAATGCATCGCAACACCTTCACACAAAACTCACgatttcagattttaaaaaaagagcatttCATAAACTAAGGAtgaaacatttacacacaaatgAATCACAGTTTCATGGTTTTCATTGTTGACGCGCTAgactcagatggagggcaggaagtgattctcctacataggaatcgctatcagaacatcaatTGTTctgcaaacaaatgtttgcatatgtatGTAGACTGTATATATCAAGTATGTAGACTGCGTCCatgcttttgtatgctttcatgT

Function

symbol description
micos13 Predicted to be involved in cristae formation. Predicted to be located in mitochondrial inner membrane. Predicted to be part of MICOS complex. Predicted to be active in mitochondrial crista junction. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 37. Orthologous to human MICOS13 (mitochondrial contact site and cristae organizing system subunit 13).

GO:

id name namespace
GO:0042407 cristae formation biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0044284 mitochondrial crista junction cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0061617 MICOS complex cellular_component
GO:0005739 mitochondrion cellular_component
GO:0003674 molecular_function molecular_function

KEGG:

id description
ko03029 Mitochondrial biogenesis

ZFIN:

id description
ZDB-GENE-050309-178 Predicted to be involved in cristae formation. Predicted to be located in mitochondrial inner membrane. Predicted to be part of MICOS complex. Predicted to be active in mitochondrial crista junction. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 37. Orthologous to human MICOS13 (mitochondrial contact site and cristae organizing system subunit 13).

Ensembl:

ensembl_id ENSDARG00000071378

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041440 False 829 mRNA 0.40 4 19547476 19552803
TCONS_00041441 True 795 mRNA 0.39 2 19549929 19552796

Neighbor

gene id symbol gene type direction distance location
XLOC_021091 si:dkey-78l4.11 coding downstream 42164 19504185 ~ 19505312 (-)
XLOC_021090 BX936298.1 coding downstream 117552 19429806 ~ 19429924 (-)
XLOC_021089 BX936298.2 coding downstream 147541 19397226 ~ 19399935 (-)
XLOC_021088 BX927243.3 coding downstream 331288 19215022 ~ 19216188 (-)
XLOC_021087 BX927243.2 coding downstream 339989 19206321 ~ 19207487 (-)
XLOC_021093 NA coding upstream 45242 19598045 ~ 19602462 (-)
XLOC_021094 NA coding upstream 69937 19622740 ~ 19638029 (-)
XLOC_021095 celf5a coding upstream 112814 19665617 ~ 20011604 (-)
XLOC_021096 rxfp3.2b coding upstream 551903 20104706 ~ 20105969 (-)
XLOC_021097 creb3l3a coding upstream 559912 20112715 ~ 20126230 (-)
XLOC_021085 NA non-coding downstream 535717 19006584 ~ 19011759 (-)
XLOC_021106 BX088720.1 non-coding upstream 937638 20490441 ~ 20490557 (-)
XLOC_021107 NA non-coding upstream 969401 20522204 ~ 20547540 (-)
XLOC_021117 CU693455.1 non-coding upstream 1566099 21118902 ~ 21119016 (-)

Expression


Co-expression Network