RNA id: TCONS_00041437


Basic Information

Item Value
RNA id TCONS_00041437
length 119
RNA type rRNA
GC content 0.49
exon number 1
gene id XLOC_021090
representative True

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 19429806 ~ 19429924 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCATGTTGGCAGCTAGCTCTTTGCAACTCTCACATTGTCgctcactgaagctaaacagggctgcGCTCGGTCAGTACCTGCATGGTAGACTACATGGGAAAACTTGGTTGATGCATGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000119897

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00042392 lncRNA downstream 418047 19006584 ~ 19011759 (-) True XLOC_021085
TCONS_00042391 lncRNA downstream 431632 18993839 ~ 18998174 (-) True XLOC_021084
TCONS_00042390 lncRNA downstream 483212 18942516 ~ 18946594 (-) True XLOC_021083
TCONS_00042389 lncRNA downstream 597760 18823190 ~ 18832046 (-) True XLOC_021082
TCONS_00042388 lncRNA downstream 710939 18712978 ~ 18718867 (-) True XLOC_021079
TCONS_00042393 lncRNA upstream 168121 19598045 ~ 19602462 (-) True XLOC_021093
TCONS_00042394 lncRNA upstream 192816 19622740 ~ 19638029 (-) True XLOC_021094
TCONS_00042395 lncRNA upstream 1092280 20522204 ~ 20547540 (-) True XLOC_021107
TCONS_00041468 lncRNA upstream 1285133 20715057 ~ 20716028 (-) True XLOC_021110
TCONS_00042396 lncRNA upstream 1689972 21119896 ~ 21121096 (-) True XLOC_021118
TCONS_00041429 mRNA downstream 327495 19018602 ~ 19102311 (-) False XLOC_021086
TCONS_00041430 mRNA downstream 327550 19098533 ~ 19102256 (-) True XLOC_021086
TCONS_00041428 mRNA downstream 650574 18768251 ~ 18779232 (-) True XLOC_021081
TCONS_00041427 mRNA downstream 650818 18766061 ~ 18778988 (-) False XLOC_021081
TCONS_00041426 mRNA downstream 680493 18727900 ~ 18749313 (-) True XLOC_021080
TCONS_00041438 mRNA upstream 74261 19504185 ~ 19505312 (-) False XLOC_021091
TCONS_00041439 mRNA upstream 74273 19504197 ~ 19504690 (-) True XLOC_021091
TCONS_00041440 mRNA upstream 117552 19547476 ~ 19552803 (-) False XLOC_021092
TCONS_00041441 mRNA upstream 120005 19549929 ~ 19552796 (-) True XLOC_021092
TCONS_00041442 mRNA upstream 235693 19665617 ~ 20011604 (-) False XLOC_021095
TCONS_00041435 other downstream 29871 19397226 ~ 19399935 (-) False XLOC_021089
TCONS_00041436 other downstream 29871 19398172 ~ 19399935 (-) True XLOC_021089
TCONS_00041433 other downstream 213618 19215022 ~ 19216188 (-) False XLOC_021088
TCONS_00041434 other downstream 213646 19215155 ~ 19216160 (-) True XLOC_021088
TCONS_00041431 other downstream 222319 19206321 ~ 19207487 (-) False XLOC_021087
TCONS_00041448 other upstream 734694 20164618 ~ 20166209 (-) False XLOC_021098
TCONS_00041449 other upstream 735759 20165683 ~ 20166583 (-) True XLOC_021098
TCONS_00041451 other upstream 826843 20256767 ~ 20261899 (-) True XLOC_021099
TCONS_00041464 other upstream 1060517 20490441 ~ 20490557 (-) True XLOC_021106
TCONS_00041481 other upstream 1688978 21118902 ~ 21119016 (-) True XLOC_021117