G256060


Basic Information

Item Value
gene id G256060
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 39875454 ~ 39875669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU291773
ctgaacTTCTCcataactttgtccctgacctgtttggagagctccttggtcttcatggtgctgcttgcttagtggtgttgcagactctgcggccattcagaacaggtgtatatatactgagatcatgtgacacttaaataaagtccacctgtgtgcaatctacctaattatgtgacttctgaaggtaattgtttgcaccagatcttatttgggggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU291773 True 216 lncRNA 0.44 1 39875454 39875669

Neighbor

gene id symbol gene type direction distance location
asmtl asmtl coding upstream 93050 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 106028 39745774 ~ 39769426 (+)
LOC110519964 LOC106586025 coding upstream 133605 39713690 ~ 39741849 (+)
LOC110519963 LOC106586016 coding upstream 165789 39706441 ~ 39709665 (+)
LOC110519960 LOC106586058 coding upstream 207157 39658753 ~ 39668297 (+)
LOC110519969 LOC106586020 coding downstream 564371 40440040 ~ 40452542 (+)
dnah7 dnah7 coding downstream 585492 40461161 ~ 40702678 (+)
LOC118944668 NA coding downstream 982628 40858297 ~ 40861180 (+)
LOC110519971 tmeff2 coding downstream 1678802 41554471 ~ 41725755 (+)
LOC110519972 sdpr coding downstream 1864421 41740090 ~ 41767612 (+)
G256055 NA non-coding upstream 2471 39872684 ~ 39872983 (+)
G255459 NA non-coding upstream 27333 39847770 ~ 39848121 (+)
G255447 NA non-coding upstream 43082 39832119 ~ 39832372 (+)
G255445 NA non-coding upstream 43974 39831186 ~ 39831480 (+)
G255444 NA non-coding upstream 45549 39829597 ~ 39829905 (+)
G256142 NA non-coding downstream 67871 39943540 ~ 39943767 (+)
G256144 LOC106567308 non-coding downstream 68743 39944412 ~ 39944666 (+)
G256288 NA non-coding downstream 229477 40105146 ~ 40106342 (+)
G256457 NA non-coding downstream 382611 40258280 ~ 40260434 (+)
G256580 NA non-coding downstream 416859 40292528 ~ 40292954 (+)
G254816 NA other upstream 1030898 38843510 ~ 38844556 (+)
G254445 NA other upstream 1274588 38600487 ~ 38600866 (+)
G254204 NA other upstream 1433720 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 1782720 38092322 ~ 38092734 (+)
G261749 NA other downstream 4376400 44252069 ~ 44252551 (+)
G262037 NA other downstream 4644750 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 5963252 45838921 ~ 45839480 (+)
G263710 NA other downstream 6058450 45934119 ~ 45934418 (+)

Expression


Co-expression Network