G256580


Basic Information

Item Value
gene id G256580
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 40292528 ~ 40292954 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU292310
ATCTGAAACTGTCTCCAAAGAAATGCCATTTCATGAAGAGGTCAGTGCGGTTCTTGGGGCATGTCATCAGTGAAGGAGGTGTGGCCACAGACCCAGAAAAAGTGAAGGCTATTGCAGAGATGACAAAGAAGGATCTCATGGAGGATATCACGGACGTGCCCTCCCAGGGGAAGATTCGGTCCATTCTCGGAATGATAGTCTATTaccagtcatacgctggacctagttttgtcccatggaataaatgttgtggatcttaatgtttttcctcataatcctggactatcggaccaccattttattacgcttgcaattgcaacaaataatctgctcagaccccaaccaaggatcatcaaaagtcgtgctataaattcacagacaacacaaagattccttgatgtccttccagattccctctgtctaccca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU292310 True 427 lncRNA 0.44 1 40292528 40292954

Neighbor

gene id symbol gene type direction distance location
asmtl asmtl coding upstream 510124 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 523102 39745774 ~ 39769426 (+)
LOC110519964 LOC106586025 coding upstream 550679 39713690 ~ 39741849 (+)
LOC110519963 LOC106586016 coding upstream 582863 39706441 ~ 39709665 (+)
LOC110519960 LOC106586058 coding upstream 624231 39658753 ~ 39668297 (+)
LOC110519969 LOC106586020 coding downstream 147086 40440040 ~ 40452542 (+)
dnah7 dnah7 coding downstream 168207 40461161 ~ 40702678 (+)
LOC118944668 NA coding downstream 565343 40858297 ~ 40861180 (+)
LOC110519971 tmeff2 coding downstream 1261517 41554471 ~ 41725755 (+)
LOC110519972 sdpr coding downstream 1447136 41740090 ~ 41767612 (+)
G256457 NA non-coding upstream 32094 40258280 ~ 40260434 (+)
G256288 NA non-coding upstream 186186 40105146 ~ 40106342 (+)
G256144 LOC106567308 non-coding upstream 347862 39944412 ~ 39944666 (+)
G256142 NA non-coding upstream 348761 39943540 ~ 39943767 (+)
G256060 NA non-coding upstream 416859 39875454 ~ 39875669 (+)
G256584 NA non-coding downstream 4275 40297229 ~ 40297452 (+)
G256604 NA non-coding downstream 22117 40315071 ~ 40315388 (+)
G256607 NA non-coding downstream 24384 40317338 ~ 40317543 (+)
G256611 LOC106613263 non-coding downstream 26206 40319160 ~ 40319537 (+)
G256638 NA non-coding downstream 46606 40339560 ~ 40339913 (+)
G254816 NA other upstream 1447972 38843510 ~ 38844556 (+)
G254445 NA other upstream 1691662 38600487 ~ 38600866 (+)
G254204 NA other upstream 1850794 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 2199794 38092322 ~ 38092734 (+)
G261749 NA other downstream 3959115 44252069 ~ 44252551 (+)
G262037 NA other downstream 4227465 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 5545967 45838921 ~ 45839480 (+)
G263710 NA other downstream 5641165 45934119 ~ 45934418 (+)

Expression


Co-expression Network