G256611 (LOC106613263)


Basic Information

Item Value
gene id G256611
gene name LOC106613263
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 40319160 ~ 40319537 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU292341
gacgtccacaggtgggggttgtgcttacagtccaacaccgtgcaggacgtttgtcattttccagagaacaccaagattggcaaattcgccactggcgccctgtgctcttcacagatgaaagcaggttcacactgagcacgtgacagagtctggagacgccgtggagaacgttctgctgcatgcaacatcctccagcatgaccggtttggcggtgggtcagtcatggtgtgggttggcatttctttgggggtccACACAGcactccatgtgcttgccagaggtagcctgactgccattaggtaccgagatgagatcctcagaccccttgtgagaccatatgctggtgcggttggccctgggttcctcctaatgcaagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU292341 True 378 lncRNA 0.55 1 40319160 40319537

Neighbor

gene id symbol gene type direction distance location
asmtl asmtl coding upstream 536756 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 549734 39745774 ~ 39769426 (+)
LOC110519964 LOC106586025 coding upstream 577311 39713690 ~ 39741849 (+)
LOC110519963 LOC106586016 coding upstream 609495 39706441 ~ 39709665 (+)
LOC110519960 LOC106586058 coding upstream 650863 39658753 ~ 39668297 (+)
LOC110519969 LOC106586020 coding downstream 120503 40440040 ~ 40452542 (+)
dnah7 dnah7 coding downstream 141624 40461161 ~ 40702678 (+)
LOC118944668 NA coding downstream 538760 40858297 ~ 40861180 (+)
LOC110519971 tmeff2 coding downstream 1234934 41554471 ~ 41725755 (+)
LOC110519972 sdpr coding downstream 1420553 41740090 ~ 41767612 (+)
G256607 NA non-coding upstream 1617 40317338 ~ 40317543 (+)
G256604 NA non-coding upstream 3772 40315071 ~ 40315388 (+)
G256584 NA non-coding upstream 21708 40297229 ~ 40297452 (+)
G256580 NA non-coding upstream 26206 40292528 ~ 40292954 (+)
G256457 NA non-coding upstream 58726 40258280 ~ 40260434 (+)
G256638 NA non-coding downstream 20023 40339560 ~ 40339913 (+)
G256639 NA non-coding downstream 20600 40340137 ~ 40340361 (+)
G256658 NA non-coding downstream 38661 40358198 ~ 40358528 (+)
G256671 NA non-coding downstream 47988 40367525 ~ 40367869 (+)
G256673 NA non-coding downstream 48884 40368421 ~ 40368737 (+)
G254816 NA other upstream 1474604 38843510 ~ 38844556 (+)
G254445 NA other upstream 1718294 38600487 ~ 38600866 (+)
G254204 NA other upstream 1877426 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 2226426 38092322 ~ 38092734 (+)
G261749 NA other downstream 3932532 44252069 ~ 44252551 (+)
G262037 NA other downstream 4200882 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 5519384 45838921 ~ 45839480 (+)
G263710 NA other downstream 5614582 45934119 ~ 45934418 (+)

Expression


Co-expression Network