G256658


Basic Information

Item Value
gene id G256658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 40358198 ~ 40358528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU292388
caaatgcaatataggaaaacacagcttagccttttgttaatccacctgtcgtctcagattttgaaattatgctttacagcgaaagcaatccaagcgtttgtgtaaatgtATCGATCGCacaacaaaacattaagtacacttagcatcaggtagcttggtcacgaaaatcataaatgcaatcaaattaatcgtttacctttgatgatcttcggatgtttcactcatgagactcccagttacacaacaaatgttccttttgttccataaagattattttatatccaaaatacctctgtttgtttgtcgcattattttcagaaatccacaggaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU292388 True 331 lncRNA 0.35 1 40358198 40358528

Neighbor

gene id symbol gene type direction distance location
asmtl asmtl coding upstream 575794 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 588772 39745774 ~ 39769426 (+)
LOC110519964 LOC106586025 coding upstream 616349 39713690 ~ 39741849 (+)
LOC110519963 LOC106586016 coding upstream 648533 39706441 ~ 39709665 (+)
LOC110519960 LOC106586058 coding upstream 689901 39658753 ~ 39668297 (+)
LOC110519969 LOC106586020 coding downstream 81512 40440040 ~ 40452542 (+)
dnah7 dnah7 coding downstream 102633 40461161 ~ 40702678 (+)
LOC118944668 NA coding downstream 499769 40858297 ~ 40861180 (+)
LOC110519971 tmeff2 coding downstream 1195943 41554471 ~ 41725755 (+)
LOC110519972 sdpr coding downstream 1381562 41740090 ~ 41767612 (+)
G256639 NA non-coding upstream 17837 40340137 ~ 40340361 (+)
G256638 NA non-coding upstream 18285 40339560 ~ 40339913 (+)
G256611 LOC106613263 non-coding upstream 38661 40319160 ~ 40319537 (+)
G256607 NA non-coding upstream 40655 40317338 ~ 40317543 (+)
G256604 NA non-coding upstream 42810 40315071 ~ 40315388 (+)
G256671 NA non-coding downstream 8997 40367525 ~ 40367869 (+)
G256673 NA non-coding downstream 9893 40368421 ~ 40368737 (+)
G256675 NA non-coding downstream 11964 40370492 ~ 40370706 (+)
G257218 NA non-coding downstream 428667 40787195 ~ 40787426 (+)
G257246 NA non-coding downstream 448188 40806716 ~ 40807004 (+)
G254816 NA other upstream 1513642 38843510 ~ 38844556 (+)
G254445 NA other upstream 1757332 38600487 ~ 38600866 (+)
G254204 NA other upstream 1916464 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 2265464 38092322 ~ 38092734 (+)
G261749 NA other downstream 3893541 44252069 ~ 44252551 (+)
G262037 NA other downstream 4161891 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 5480393 45838921 ~ 45839480 (+)
G263710 NA other downstream 5575591 45934119 ~ 45934418 (+)

Expression


Co-expression Network