G257218


Basic Information

Item Value
gene id G257218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 40787195 ~ 40787426 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU292976
gaatataagatatgcatattattagtatattttaatagaaaacactctgaattttctaaaactgtttgaatcatgtctgtgactataacagaacttatgtagcaggcaaaacccagaggactaaccgttcagattttttttgttaggtctctgtctgttcagtgagttatcattgggaaacgatatttcttaggcacttgttttcagttcctcaGTTTGAGATATTACGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU292976 True 232 lncRNA 0.33 1 40787195 40787426

Neighbor

gene id symbol gene type direction distance location
dnah7 dnah7 coding upstream 84517 40461161 ~ 40702678 (+)
LOC110519969 LOC106586020 coding upstream 334653 40440040 ~ 40452542 (+)
asmtl asmtl coding upstream 1004791 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 1017769 39745774 ~ 39769426 (+)
LOC110519964 LOC106586025 coding upstream 1045346 39713690 ~ 39741849 (+)
LOC118944668 NA coding downstream 70871 40858297 ~ 40861180 (+)
LOC110519971 tmeff2 coding downstream 767045 41554471 ~ 41725755 (+)
LOC110519972 sdpr coding downstream 952664 41740090 ~ 41767612 (+)
spegb LOC106586064 coding downstream 999527 41786953 ~ 41915322 (+)
LOC110519974 LOC106586063 coding downstream 1154673 41922501 ~ 41965278 (+)
G256675 NA non-coding upstream 416489 40370492 ~ 40370706 (+)
G256673 NA non-coding upstream 418458 40368421 ~ 40368737 (+)
G256671 NA non-coding upstream 419326 40367525 ~ 40367869 (+)
G256658 NA non-coding upstream 428667 40358198 ~ 40358528 (+)
G256639 NA non-coding upstream 446834 40340137 ~ 40340361 (+)
G257246 NA non-coding downstream 19290 40806716 ~ 40807004 (+)
G257247 NA non-coding downstream 21042 40808468 ~ 40808734 (+)
G257269 NA non-coding downstream 34275 40821701 ~ 40822470 (+)
G257270 NA non-coding downstream 35152 40822578 ~ 40822788 (+)
G257271 NA non-coding downstream 35485 40822911 ~ 40823317 (+)
LOC110519960 LOC106586058 other upstream 1119107 39658753 ~ 39668297 (+)
G254816 NA other upstream 1942639 38843510 ~ 38844556 (+)
G254445 NA other upstream 2186329 38600487 ~ 38600866 (+)
G254204 NA other upstream 2345461 38441166 ~ 38441734 (+)
G261749 NA other downstream 3464643 44252069 ~ 44252551 (+)
G262037 NA other downstream 3732993 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 5051495 45838921 ~ 45839480 (+)
G263710 NA other downstream 5146693 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 5288058 46075484 ~ 46079425 (+)

Expression


Co-expression Network