G257270


Basic Information

Item Value
gene id G257270
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 40822578 ~ 40822788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU293028
gtgtctcccagatggcttgtggcaaactttaaacaacacttttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagacttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgtagttcatccagagtgatcatgggcctcttggctgcatctctgatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU293028 True 211 lncRNA 0.44 1 40822578 40822788

Neighbor

gene id symbol gene type direction distance location
dnah7 dnah7 coding upstream 119900 40461161 ~ 40702678 (+)
LOC110519969 LOC106586020 coding upstream 370036 40440040 ~ 40452542 (+)
asmtl asmtl coding upstream 1040174 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 1053152 39745774 ~ 39769426 (+)
LOC110519964 LOC106586025 coding upstream 1080729 39713690 ~ 39741849 (+)
LOC118944668 NA coding downstream 35509 40858297 ~ 40861180 (+)
LOC110519971 tmeff2 coding downstream 731683 41554471 ~ 41725755 (+)
LOC110519972 sdpr coding downstream 917302 41740090 ~ 41767612 (+)
spegb LOC106586064 coding downstream 964165 41786953 ~ 41915322 (+)
LOC110519974 LOC106586063 coding downstream 1119311 41922501 ~ 41965278 (+)
G257269 NA non-coding upstream 108 40821701 ~ 40822470 (+)
G257247 NA non-coding upstream 13844 40808468 ~ 40808734 (+)
G257246 NA non-coding upstream 15574 40806716 ~ 40807004 (+)
G257218 NA non-coding upstream 35152 40787195 ~ 40787426 (+)
G256675 NA non-coding upstream 451872 40370492 ~ 40370706 (+)
G257271 NA non-coding downstream 123 40822911 ~ 40823317 (+)
G257298 NA non-coding downstream 18253 40841041 ~ 40841275 (+)
G257299 NA non-coding downstream 19423 40842211 ~ 40842433 (+)
G257303 LOC106594194 non-coding downstream 20822 40843610 ~ 40843839 (+)
G257435 NA non-coding downstream 122966 40945754 ~ 40946128 (+)
LOC110519960 LOC106586058 other upstream 1154490 39658753 ~ 39668297 (+)
G254816 NA other upstream 1978022 38843510 ~ 38844556 (+)
G254445 NA other upstream 2221712 38600487 ~ 38600866 (+)
G254204 NA other upstream 2380844 38441166 ~ 38441734 (+)
G261749 NA other downstream 3429281 44252069 ~ 44252551 (+)
G262037 NA other downstream 3697631 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 5016133 45838921 ~ 45839480 (+)
G263710 NA other downstream 5111331 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 5252696 46075484 ~ 46079425 (+)

Expression


Co-expression Network