G257435


Basic Information

Item Value
gene id G257435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 40945754 ~ 40946128 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU293197
cccctatccacatcaacgggacagtagtggagagggtagtgagttttaagttcctcggcgtacacatcacgtacaaactgaattggtccattcacacagacagcgtggtgataaggcgcaacagcgcctcttcaacctcagggtgcTGAAGAAACtcagaaacttttacagatgcacaatcgagagcatcctgtcgggctgtatcacagcctggtacggcaactgctccgcccacaaccgcaaggctctccagagggtagtgaggtctgcacaacgcatcaccgggggcaaactatctgccctccaggacacctacacaacccaatgtcacaggaaggccataaagatcatcaaggacaacaaccacccgagcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU293197 True 375 lncRNA 0.53 1 40945754 40946128

Neighbor

gene id symbol gene type direction distance location
LOC118944668 NA coding upstream 84574 40858297 ~ 40861180 (+)
dnah7 dnah7 coding upstream 243076 40461161 ~ 40702678 (+)
LOC110519969 LOC106586020 coding upstream 493212 40440040 ~ 40452542 (+)
asmtl asmtl coding upstream 1163350 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 1176328 39745774 ~ 39769426 (+)
LOC110519971 tmeff2 coding downstream 608343 41554471 ~ 41725755 (+)
LOC110519972 sdpr coding downstream 793962 41740090 ~ 41767612 (+)
spegb LOC106586064 coding downstream 840825 41786953 ~ 41915322 (+)
LOC110519974 LOC106586063 coding downstream 995971 41922501 ~ 41965278 (+)
LOC110519975 LOC106586062 coding downstream 1041127 41987255 ~ 42160686 (+)
G257303 LOC106594194 non-coding upstream 101915 40843610 ~ 40843839 (+)
G257299 NA non-coding upstream 103321 40842211 ~ 40842433 (+)
G257298 NA non-coding upstream 104479 40841041 ~ 40841275 (+)
G257271 NA non-coding upstream 122437 40822911 ~ 40823317 (+)
G257270 NA non-coding upstream 122966 40822578 ~ 40822788 (+)
G257482 NA non-coding downstream 33603 40979731 ~ 40980095 (+)
G257624 NA non-coding downstream 228875 41175003 ~ 41252652 (+)
G257901 NA non-coding downstream 324300 41270428 ~ 41270633 (+)
G258000 NA non-coding downstream 432890 41379018 ~ 41379405 (+)
G258303 NA non-coding downstream 685811 41631939 ~ 41703505 (+)
LOC110519960 LOC106586058 other upstream 1277666 39658753 ~ 39668297 (+)
G254816 NA other upstream 2101198 38843510 ~ 38844556 (+)
G254445 NA other upstream 2344888 38600487 ~ 38600866 (+)
G254204 NA other upstream 2504020 38441166 ~ 38441734 (+)
G261749 NA other downstream 3305941 44252069 ~ 44252551 (+)
G262037 NA other downstream 3574291 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 4892793 45838921 ~ 45839480 (+)
G263710 NA other downstream 4987991 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 5129356 46075484 ~ 46079425 (+)

Expression


Co-expression Network