G257271


Basic Information

Item Value
gene id G257271
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 40822911 ~ 40823317 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU293029
gcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgaactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU293029 True 407 lncRNA 0.38 1 40822911 40823317

Neighbor

gene id symbol gene type direction distance location
dnah7 dnah7 coding upstream 120233 40461161 ~ 40702678 (+)
LOC110519969 LOC106586020 coding upstream 370369 40440040 ~ 40452542 (+)
asmtl asmtl coding upstream 1040507 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 1053485 39745774 ~ 39769426 (+)
LOC110519964 LOC106586025 coding upstream 1081062 39713690 ~ 39741849 (+)
LOC118944668 NA coding downstream 34980 40858297 ~ 40861180 (+)
LOC110519971 tmeff2 coding downstream 731154 41554471 ~ 41725755 (+)
LOC110519972 sdpr coding downstream 916773 41740090 ~ 41767612 (+)
spegb LOC106586064 coding downstream 963636 41786953 ~ 41915322 (+)
LOC110519974 LOC106586063 coding downstream 1118782 41922501 ~ 41965278 (+)
G257270 NA non-coding upstream 123 40822578 ~ 40822788 (+)
G257269 NA non-coding upstream 441 40821701 ~ 40822470 (+)
G257247 NA non-coding upstream 14177 40808468 ~ 40808734 (+)
G257246 NA non-coding upstream 15907 40806716 ~ 40807004 (+)
G257218 NA non-coding upstream 35485 40787195 ~ 40787426 (+)
G257298 NA non-coding downstream 17724 40841041 ~ 40841275 (+)
G257299 NA non-coding downstream 18894 40842211 ~ 40842433 (+)
G257303 LOC106594194 non-coding downstream 20293 40843610 ~ 40843839 (+)
G257435 NA non-coding downstream 122437 40945754 ~ 40946128 (+)
G257482 NA non-coding downstream 156414 40979731 ~ 40980095 (+)
LOC110519960 LOC106586058 other upstream 1154823 39658753 ~ 39668297 (+)
G254816 NA other upstream 1978355 38843510 ~ 38844556 (+)
G254445 NA other upstream 2222045 38600487 ~ 38600866 (+)
G254204 NA other upstream 2381177 38441166 ~ 38441734 (+)
G261749 NA other downstream 3428752 44252069 ~ 44252551 (+)
G262037 NA other downstream 3697102 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 5015604 45838921 ~ 45839480 (+)
G263710 NA other downstream 5110802 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 5252167 46075484 ~ 46079425 (+)

Expression


Co-expression Network