G256144 (LOC106567308)


Basic Information

Item Value
gene id G256144
gene name LOC106567308
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 39944412 ~ 39944666 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU291860
TACTTTATTTTCTCtcaccaccgctctcaccttcccGGGATCCATCTGTACACTCCCTGCAGCGATGATGTAACCCAGGAAGGGGATGGTGGAGCAATGGGCTTAGCACTTCTCTGCTTTCacaaaaagctggttctccaTGAGGTGTTGGAGAACCTGTCCGTCGTGGAGCACGTCTTCTTGGGCAGAGCAGGAGAAGACGAGGATGTTGTCGAGGTAGACAAAGACAAACCAGTTCAACTTGTCACGGAGAAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106567308

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU291860 True 255 lncRNA 0.51 1 39944412 39944666

Neighbor

gene id symbol gene type direction distance location
asmtl asmtl coding upstream 162008 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 174986 39745774 ~ 39769426 (+)
LOC110519964 LOC106586025 coding upstream 202563 39713690 ~ 39741849 (+)
LOC110519963 LOC106586016 coding upstream 234747 39706441 ~ 39709665 (+)
LOC110519960 LOC106586058 coding upstream 276115 39658753 ~ 39668297 (+)
LOC110519969 LOC106586020 coding downstream 495374 40440040 ~ 40452542 (+)
dnah7 dnah7 coding downstream 516495 40461161 ~ 40702678 (+)
LOC118944668 NA coding downstream 913631 40858297 ~ 40861180 (+)
LOC110519971 tmeff2 coding downstream 1609805 41554471 ~ 41725755 (+)
LOC110519972 sdpr coding downstream 1795424 41740090 ~ 41767612 (+)
G256142 NA non-coding upstream 645 39943540 ~ 39943767 (+)
G256060 NA non-coding upstream 68743 39875454 ~ 39875669 (+)
G256055 NA non-coding upstream 71429 39872684 ~ 39872983 (+)
G255459 NA non-coding upstream 96291 39847770 ~ 39848121 (+)
G255447 NA non-coding upstream 112040 39832119 ~ 39832372 (+)
G256288 NA non-coding downstream 160480 40105146 ~ 40106342 (+)
G256457 NA non-coding downstream 313614 40258280 ~ 40260434 (+)
G256580 NA non-coding downstream 347862 40292528 ~ 40292954 (+)
G256584 NA non-coding downstream 352563 40297229 ~ 40297452 (+)
G256604 NA non-coding downstream 370405 40315071 ~ 40315388 (+)
G254816 NA other upstream 1099856 38843510 ~ 38844556 (+)
G254445 NA other upstream 1343546 38600487 ~ 38600866 (+)
G254204 NA other upstream 1502678 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 1851678 38092322 ~ 38092734 (+)
G261749 NA other downstream 4307403 44252069 ~ 44252551 (+)
G262037 NA other downstream 4575753 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 5894255 45838921 ~ 45839480 (+)
G263710 NA other downstream 5989453 45934119 ~ 45934418 (+)

Expression


Co-expression Network